Oncorhynchus tshawytscha (Chinook salmon): 112262002
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Entry
112262002 CDS
T05605
Name
(RefSeq) frizzled-3
KO
K02329
frizzled 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
otw04310
Wnt signaling pathway
otw04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112262002
04150 mTOR signaling pathway
112262002
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112262002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112262002
G protein-coupled receptors [BR:
otw04030
]
Frizzled / Smoothened family
112262002
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
112262002
NCBI-ProteinID:
XP_042186062
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Position
LG11:complement(40524173..40565722)
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AA seq
725 aa
AA seq
DB search
MEAAGFPLRWDCTSPAIADSHRARVMPRSLFLLLLFLSSLCSTCLSIHAETAESHSTFTC
EPVGLRMCQDLPYNATFMPNLLNHYDQKTAALAMEPFHPMVNLQCSEDLRMFLCALYAPV
CMEYGRVSMPCRALCHRAKRDCHKIMEMFGVAWPDETECSRFPDCDEPYPRAVDLQTSAN
PTDISPMSVQRDFGFWCPRKLKMEPDLGYSFLGVRECSPPCPNMYFQRPELTFARYFIGV
VSIVCLSATLFSFLTFLIDVTRFRYPERPIIFYAACYMMVSLVFFLGFLLEDRVACNAAS
PTQYRAATITQGSHNKACTLLFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKA
LLFHTCAWGLPGCLTVALLALNKIEGDGVSGVCFVGLYDITALRWFLLAPLCLNVAVGVA
LLLTGIVALNRVRMEIPLEKENQDKLVKFMIRIGVFSVLYLVPLLTVISCYLYEHSYRSV
WETTWFQERCRDYHIPCPFQVEQTSRPDLALFLIKYLMMLVVGIPSVFWVGSKKTCFKWA
SFLHRRRNKDSGVNESRQVLQEPDFSQSLLRDPHTPIIRKSRGTSTQGTSTHASSTHLAI
LDEPDDPRHAPDDRRPIHSLGHTSSTRSKAGSVHSKTSYHGSLHRSRDGRYTPCSYRGGE
ERTLPPHGSTPRHDHLLSTHSSLHGLDAQSQHSSQCDLSVATPTLITHGTSFSRVTNNGD
NGASA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcaggattccccttgaggtgggactgcacatcacctgcaatagcagactcg
cacagagcgagggtcatgcctaggtcactcttcctcttgcttctcttcctctcatccctc
tgctccacctgtctgtccatccatgcggagacagcagagagccacagtacgtttacatgt
gagccagtaggactgcggatgtgccaggacctgccttacaacgccaccttcatgcccaac
ctcctcaaccactacgaccagaagacggccgcactcgccatggagcccttccaccccatg
gtgaacctgcagtgttcggaggacctgaggatgtttctgtgtgccctctacgctccagtc
tgtatggagtatggccgcgtgtccatgccctgccgagccctgtgccaccgcgccaagaga
gactgtcacaaaatcatggagatgtttggggtggcctggccagacgagacagagtgtagc
aggttcccagactgtgacgagccctacccccgtgcggtggacctccagaccagtgcaaat
cccaccgatatctctcccatgtctgtccagagggatttcggcttctggtgcccccgcaag
ctcaaaatggaacccgacctgggctactcattcctgggcgtgagggagtgctcgcccccc
tgccccaacatgtacttccagcgcccggaactcacctttgcccgctacttcatcggcgtg
gtttccatcgtctgtctctcggcaacactcttcagcttcctcaccttcctcatcgacgtc
acgaggttccgctacccggagcggccaatcatcttctatgccgcttgctacatgatggtg
tcacttgtgttcttcctgggcttcctattggaggacagggtggcttgcaacgcggcgagc
cccacccagtaccgggcggccaccatcacacagggctcccacaacaaggcgtgcacgctg
ctgttcatggtgctctacttcttcacaatggcgggaagcgtgtggtgggtcatcctcacc
attacctggttcctggcggccgtgcccaagtggggcagcgaggccatcgagaagaaggcc
cttctctttcacacctgtgcctggggcctgcccggctgcctcaccgtggccctgctggcc
ctcaacaagatcgagggcgatggcgtgagtggcgtgtgcttcgtgggcctctacgacatc
acggcgctgcgctggttcctgctggcgccgctctgcctcaacgtggcggtgggtgtggct
ctgcttctgacggggatcgtggcgcttaaccgtgtgcgtatggagatccctctggagaag
gagaaccaggacaagctggtgaagtttatgatccgtatcggggtgttctctgtgctttac
ctggtgcccctgcttacggtcatctcctgctacctgtatgaacacagctacaggtctgtc
tgggagaccacctggttccaggagcgctgcagagactaccacataccctgtcccttccag
gttgagcagaccagtcgtccagacctggccctgttcctcattaagtacctgatgatgctg
gtggtggggattccctcagttttctgggtgggcagcaagaagacctgcttcaaatgggcc
agcttcctacacagacgcagaaacaaagatagtggggtgaatgagagcagacaggtgctc
caggagccagacttttcccagtctctactgagggacccccacacccccatcatcaggaaa
tcacggggaacctccacccagggcacctccacccatgcctcctccactcacctggccatc
ctggacgagcctgacgaccctagacacgcccctgatgaccgcagaccaatccactcactg
ggccacacctcctccacccgcagcaaggctggcagcgtgcacagcaagaccagttaccat
ggcagtctacatcgctcccgagatggacgctacaccccctgtagttaccgaggcggcgag
gagcgcactctacccccccacggcagcacgccccgccacgaccacctgctgtccactcac
agcagcctccacggtctggatgcccaatcacagcacagcagccagtgtgatctctccgtg
gccacacccacccttatcacccacgggacgagcttcagccgcgtcactaataatggtgac
aatggagccagcgcctga
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