Oncorhynchus tshawytscha (Chinook salmon): 112262021
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Entry
112262021 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: kinase D-interacting substrate of 220 kDa B
KO
K12460
ankyrin repeat-rich membrane spanning protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
KAP_NTPase
Ank_4
Ank_3
Ank_5
SAM_KIDINS220
ANK_LRRK2
Ank_KRIT1
NPHP3_N
CitMHS
DUF2142
Motif
Other DBs
NCBI-GeneID:
112262021
NCBI-ProteinID:
XP_042186083
LinkDB
All DBs
Position
LG11:42594486..42693254
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AA seq
1716 aa
AA seq
DB search
MDTSTSLAIQSLFSYVEEDNVPAIKAHLDKFKEVDSRSENGQTLLMMASEQGSLEMVQEL
LRRGANVNLDDVDCWTALISAAKEGHVEVVKELLANNASLEHRDMGGWSALMWASYKGRV
EVAQLLLEKGASPNITGQYSVFPVIWAAGRGHAEIVHLLIKHGAKVNCSDKYGTTPLIWA
ARKGHFDSVMHLLVNGADVDQEGANSMTALIVAVRGGFNEVVKELLKRNPNVNMTDKDGN
TALMIAAKEGYTEIVQDLLDAGTYVNIPDRSGETVLIGAVRGGHVEIVRALLNKYADIDV
RGQDSKTALYWAVEKGNCTMVRDILQCNPDTESCTKDSETPLIKATKMRNIEIVELLLHR
GAKVAAVDKKGDTALHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPYNIDCTHQKS
ILTQIFGAKHLSPSESDGDMLGYDLYSSALADILSEPTMQPPICVGLYAQWGSGKSFLLK
KLEDEMKNFAGQQIEPLFQFSWLVVFLTLLLCGSVALVLGFTVTHRLAIAVSLSLLALLY
VFFVLVYYGGHREGENWNWAWVLSTRLARQVGYLELLLKLMFVNPPELPEQTTRALPVRF
LFTDYNRLSSVGGETSMAEMIATLSDACEREFGFMATRLFRVFKNEENQGKKWKKTCCVP
SFMLFVVTLGCLITAMALLAIFKVQHDNLTVNAVLIAMASVVGLALLLNCRTWWQVADSV
LNSQRKRLHSAANKMHKLKSEGFMKVLKQEVELMSKMAKTIDGFTQNQTRMTVIIDGLDA
CEQDKVLQMLDTVRVLFSKGPFISIFASDPHIIIKAINQNLNSVLRDSNINGHDYMRNIV
HLPVFLNSRSLSTTRKLCMAAPTPNGDLVNPEGWHDEMDRKLSSNSLGDQAKFGSKTALN
RRDTYRRRQIQRTVTRQMSFDLTKLLVTEDWFSDISPQTMRRLLNIVSVTGRLLRANHII
FNWDRLASWINMTEEWPYRTSWLILFLEETDGISDQVTLKTIYERISKNIPTTKDVEPLL
EIDGDIRSFEVFLSSRAPVLTARDVEMFLPCTVNLDPKLREIIADVRAAREQMHIGGVAY
PTLPLQDVPARVPSSFGQHSAACSPTGSYVGPAPPRACAPQPHSSYYSXACPQHPFYTRP
YFPNHVYHLPRHQYSSHLHPAPTQSRPSFKTGYPRDPNGLDVIAEDPREGLPSPTTTDPP
MDSASGVPGTPVVLLSSLNTDAVCERVKQIAGMDSSMLGQYTATIKKANVNGRVLSQCNL
EELKNEMNMNFGDWQLFRGMVMEQRNVEGQALQDESRAASEQGSSVVNMETARHQGQGAP
HEVGDYILNLSFEELSNMGLSLEEPTQTHRETTQHWPMTATHHTLSMSSLNFQESSNDIC
KLTDKQQAEYRDAYREYIAQMTQLDVAGGGGEKSVQPHLGQFLEYRDARNPEENAKDGSE
KDGRKPSFPTKRGAKATDVVDTDVPLDPISEEDEKLDASKAGSSKVKGPGPRYHKVPSNE
EEGSGPEESENTPLLNKGGAQASSNIALNKKDSSDSGVRSGESSSDHSLEEVLVEAEEEG
VNKLELEGLVKKRGLLPSSLSGLQDSTITRMSICSEAPSEGSPMASSPDETWFRSSSSVS
NLNRTPSTTTLNNNRNSSNNAATTNTSQDNQDTESSTPVLITPGSSTGSTSTTRPVHNQN
LCGIIHKRPLGTGETLKGCTGAPDAIVLEDERESVL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagcacctctctggccatccagagcctgttcagctacgtggaggaggacaac
gtgccggccatcaaagcccacctggacaagttcaaggaggtggacagcaggagcgagaat
ggtcagactctcctcatgatggcatcagaacagggcagcctagagatggtccaggagctc
ctcaggaggggagccaatgtcaacctggatgacgtggactgctggacggcgctgatctcg
gcggctaaggagggccatgtggaggtggtgaaggagctgctggccaacaatgccagcctg
gagcaccgggacatggggggatggagcgccctcatgtgggcttcctataagggtcgtgtg
gaggtggcccagctgctgctggagaaaggagctagccccaacatcactggccagtacagt
gtgtttcctgtcatctgggcagccggacgaggccatgctgagatcgtccatctcctcatt
aagcatggcgctaaagtcaactgctctgacaagtatggcactaccccgttgatctgggca
gccaggaagggccactttgacagtgtgatgcacctgctggtcaatggggctgatgtggac
caggagggagcgaattccatgacagctctaattgtggcggtgcggggtggtttcaatgag
gtggtgaaggagcttctgaagaggaaccccaacgtcaacatgacagacaaggacggcaac
acagccctgatgatcgctgccaaggagggctacactgagatagtacaggacctgctggat
gctggcacctacgtcaacataccagacaggagtggggagacggtactgattggagcagtg
cgaggaggacatgtggagatcgtcagagcccttctgaataaatatgccgacattgacgtc
aggggacaggacagtaagactgctctctactgggcggtagagaaggggaactgcaccatg
gtgagagacatccttcagtgcaacccggacactgagagttgcaccaaggattcagagacc
cctctgatcaaagccaccaagatgaggaacattgagatagtagagctgctcctgcacaga
ggggccaaggtggctgctgtggacaagaaaggagacacagcccttcacattgccatcaga
gggcggagccgcaagctggctgagctcctcctgaggaaccctaaagatggccgcctgctc
taccgccccaacaaagccggcgagacgccttacaacattgactgcacccaccagaaaagc
atcctcacccagatatttggagccaagcacctgtctccttctgagtctgacggtgacatg
ctggggtatgatctgtacagcagtgccctagcagacatcctcagtgagcccaccatgcag
cctcctatctgtgtgggcctgtacgcccagtggggcagcggcaagtccttcctgctcaag
aaactggaggatgagatgaagaattttgcaggccagcagattgaacctctgttccagttc
tcctggctggtggttttcctcacgctgctgctgtgtggctctgtagctctggtcctgggc
ttcacagtcacccaccgcctggccatcgccgtctccctcagcctcctcgccctgctctat
gtcttctttgtgttggtgtactatgggggtcatcgtgagggggagaactggaactgggcg
tgggtcctcagtacccgtctggcccgtcaggtgggctacctggagctgcttcttaaactc
atgttcgtcaacccccccgagctgcctgagcagaccacccgcgccctgcctgtcaggttc
ctgttcacagactacaaccgtctgtccagtgtgggaggagagacgtctatggcagagatg
atagccactctttctgacgcctgtgagagggagtttggcttcatggccacccgcctcttc
agggtgttcaagaacgaggagaaccaaggtaagaagtggaagaagacgtgctgcgtgccc
agcttcatgctgtttgtcgtgactctgggctgcctgatcacagccatggcgctgctggcc
atcttcaaggtgcagcatgacaacctgacagtgaacgcggtgctgattgccatggccagc
gtggtgggcctggccctcctgttgaactgcaggacttggtggcaggtggctgactccgtc
ctcaactctcagaggaagaggctgcacagtgctgccaacaagatgcacaagctcaagagc
gagggcttcatgaaggtgttgaagcaggaggtggagctgatgtcaaagatggccaagacc
atcgacggtttcacccagaaccagacccgcatgacggtcatcatcgacggcctggacgct
tgcgagcaggacaaagtgctgcagatgctcgacacggtgagagtgctgttctccaaaggc
cccttcatctctatttttgccagtgacccccacatcatcatcaaggccatcaaccagaac
ctgaacagcgtgctcagggactccaacatcaacggccacgactacatgaggaacatcgtc
cacctgcctgtctttctcaacagccgaagtcttagcaccaccaggaagttgtgcatggcc
gcccccactcccaacggagacctggtcaaccctgagggatggcatgatgagatggacagg
aagctatcctcgaacagtctgggggatcaggccaagtttggcagcaagacggccctcaac
cgcagagacacataccgcaggaggcagattcagaggaccgtcaccagacagatgtccttt
gacctgaccaagctgctggtcactgaggactggttcagtgacatcagcccccagaccatg
aggaggctgctcaacatcgtgtctgtcacaggtcgtctgctgagggccaatcatatcatc
tttaactgggaccgtctggcgtcatggatcaacatgacggaggagtggccctacaggacc
tcctggctcatcctcttcctggaggagaccgacggcatctcagaccaggtcaccctgaag
accatctacgagagaatctccaaaaacatccccaccaccaaagacgtggagcccctgttg
gagatcgacggggacatccgcagcttcgaggtgttcctgtcctcgcgggcacccgttctc
acggcgcgcgacgtggagatgttccttccctgcaccgtcaacctggaccccaaactccgc
gagatcattgcagatgtccgtgctgccagggagcagatgcacattggaggagtggcctat
cccacgctgcccctgcaggacgtgccagcccgcgtcccctcctctttcggccagcactcg
gctgcctgctcccccacaggctcctacgttggtcctgccccccccagggcttgtgccccc
cagccccacagcagttactacagcnatgcctgcccccagcaccccttctacacccggccc
tattttcccaatcatgtgtatcaccttccccggcatcaatacagctcccatcttcaccct
gccccgacccaatcacgcccctccttcaaaacaggctaccccagggaccccaatgggctt
gatgtaattgctgaggatcccagagagggcctcccctcccccactaccactgacccccct
atggattctgcctctggggtaccgggaacccctgtggtactcctcagctctctgaacacg
gacgcagtgtgtgagcgcgtcaaacagatcgccggcatggactctagcatgctgggccag
tataccgccactatcaagaaggccaatgtgaatggccgggtgctgtctcagtgcaacctg
gaagagctgaagaatgagatgaacatgaactttggggactggcagctcttcagagggatg
gtgatggaacagcgtaatgtggagggccaggccctgcaggatgagtcacgtgcagccagc
gagcagggcagcagcgtggtcaacatggagacggccaggcaccagggccagggagctccc
catgaggtgggtgactacatcttgaacctcagcttcgaggagctcagtaacatgggcttg
agcctggaggaacccacccagacacacagagagactacacagcactggcccatgacggcc
acccaccataccctgagtatgtccagcctcaacttccaggagtcatccaacgacatctgc
aagcttacggacaagcagcaggcagagtaccgcgatgcctaccgtgagtacatcgcccag
atgacccagctagacgtggccggaggcgggggagagaagtctgtccagccccacctgggc
cagttcctcgaataccgagatgccagaaacccagaggagaatgccaaagacgggtccgag
aaggatggccgtaagccctctttccctaccaagagaggtgctaaagccacggacgtggtt
gacactgatgtgcccctggaccccatcagcgaagaggatgagaagcttgacgcctctaaa
gcaggcagttccaaggtaaagggaccagggcctcgctaccacaaggttcccagcaacgag
gaggaggggtccgggccggaagaatcagaaaacacccctctgctcaacaaagggggtgcc
caagcgtccagcaacatcgccctaaacaagaaggactcgtccgactcgggtgtgaggtct
ggcgagagctcctcagaccactccctggaggaagtgttagtggaagcagaagaggaaggg
gttaataaattggaactggagggtctggtcaagaagaggggcctgctgcccagcagtctg
agcggccttcaggattccactatcacccgcatgtccatctgctctgaggccccgtccgag
ggcagcccaatggcctccagtcccgacgaaacctggttccgctccagctcctccgtgagc
aacctcaaccgcacccccagcaccaccacgctcaacaacaacagaaacagcagcaacaac
gctgccaccaccaacactagccaagacaaccaagacacagagagctccaccccagtcctc
atcaccccaggctccagcaccggctctacctccaccacgaggcccgtccacaaccagaac
ctgtgtgggatcatccataagaggccgctgggcaccggcgagaccctcaaaggctgcaca
ggggcccctgacgctattgtcttggaggacgagagagagagtgtcctgtga
DBGET
integrated database retrieval system
