Oncorhynchus tshawytscha (Chinook salmon): 112262033
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Entry
112262033 CDS
T05605
Name
(RefSeq) unconventional myosin-VI isoform X1
KO
K10358
myosin VI
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112262033
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112262033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262033
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112262033
04147 Exosome [BR:
otw04147
]
112262033
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112262033
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112262033
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112262033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MYO6_lever
Myosin-VI_CBD
Myosin_N
IQ
AAA_16
Motif
Other DBs
NCBI-GeneID:
112262033
NCBI-ProteinID:
XP_042186086
LinkDB
All DBs
Position
LG11:43963223..44064783
Genome browser
AA seq
1266 aa
AA seq
DB search
MEDGKPVWAPHPTDGFQLGMIVDIGADTLAIEPLNQKGKTFLAPMNQVFPAEEDVNKHME
DNCSLMYLNEGTLLNNVRVRYSKDEIYTYVANILIAVNPYYDIPKLYVPETIKSYRGRSL
GTLPPHVYAIADKAYRDMRVLKMSQSIVVSGESGAGKTENTKFVLRYLTTSYGTGQDIDE
RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKNNVVGGFVSHYLLEKSRICMQSK
EERNYHIFYRLCAGASEDIRQKLHLDSPDSFRYLNRGCTRYFASKDTDKQIMQNRKSPEH
VKLGALKDLLLDDQGDFNRMCGAMKKIGLDDTEKLDLFRVVAGVLHLGNVDFEETGSTSG
GCILMNQSSPTLAYCADLLGLDQEDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNAR
DALAKAVYSCLFDHVVRRVNQCFPFNTSSNFIGVLDIAGFEYFEHNSFEQFCINYCNEKL
QQFFNERILKEEQELYQKEGLGVSEVHYVDNQDCIDLVEAKLVGILDILDEENRLPLPSD
QHFAEAIHSKHKDHFRLTVPRKSKLAVHRNVRDDEGFIVRHFAGAVCYETTQFVEKNNDA
LHMSLESLVCESKDKFVRELFENSNNSKDYKQKAGKLSFISVGNKFKTQLNVLLEKLRST
GSSFIRCVKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRAPFHELYNMYKQY
MPDKLTRLDPRLFCKALFKALGLNENDYKFGLTRVFFRPGKFAEFDQIMKSDPDHLAELV
KKVNQWLVVSRWKKVQWCSLSVIKLKEKMKYRASALVKIQKTVRMWLCKKKHKPRVDGMV
KVRNLKMRMERFNEVVGALKEGKQEMAQQVQELGASIDTFMANIKATVMTRKEIDQEYQG
LVKSLEQLLSSMQKKKQEEDEMERLRRIEEEMERERKRREEDDQQRQQEENDRKKKSEME
HKRKQEEEERKRREEEKKIMQAEMDIQIALEREEDVQRSALLEQERRDRELAMRIAQSEA
ELINDEAQMDPSLRSNGSFSGLYPNTVRAMGSQVQALKAGGVKKYDLSKWKYAELRDVIN
TSCDIELLAACREEFHRRLKVYHAWKSKNKKRDTAAEQRAPKSITDYAQQNPAPAVATQQ
QEMAMNRQQRYFRIPFIRPADQYKDPQNKKKGWWYSHFDGPWIARQLELHPDKQPILLVA
GKDDMEMCELSLEETGLTRKRGAEILPRQFEEIWERCDGITYLRNAIESKQARPTYATAM
LQNLLQ
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggtaagccagtgtgggcgccccaccccaccgatgggttccagctgggcatg
attgtggatatcggagctgacaccctcgccatcgaaccactcaaccagaagggcaagacc
tttctggctcctatgaaccaagtgttccctgctgaggaagacgtcaacaaacatatggag
gacaactgttctcttatgtacctgaatgaaggcacgctcttaaacaacgtccgagtgcgg
tatagtaaagacgagatctatacatacgtcgccaacatcttgattgctgtgaacccttac
tatgacatccccaaactgtacgttccagagaccatcaagtcttatcgtggccggtccctg
ggcactctaccacctcacgtctacgcaatcgcggacaaggcctaccgggacatgagagtc
ctgaagatgagccagtctatcgtagtgtctggagaatctggggctgggaagacagaaaac
accaagtttgtcctcagatatttgacaacatcatatggcaccgggcaagatattgatgag
agaattgttgaagcaaaccccctgctagaggcgtttggaaacgccaagacagtccggaat
aacaacagcagtcgttttggaaaatttgtggaaatccacttcaatgaaaagaataatgtg
gtaggtggcttcgtgtcccactacctgctggaaaagtcaaggatctgcatgcagagtaaa
gaggagaggaactaccacatcttctacaggctatgtgccggagcctctgaagacatcaga
cagaagctgcaccttgactcccctgatagcttcaggtatttgaatcgaggatgcacaaga
tactttgccagcaaggacacagacaaacagatcatgcagaatcgcaagagtcctgagcat
gtgaagctgggtgccctgaaggaccttctgctggatgaccagggagacttcaacaggatg
tgcggggccatgaagaagattggcctggacgacacggagaagctggacctgttcagggtg
gtggccggggtgctgcacctgggcaacgtcgactttgaggagactgggagcacatcgggc
ggctgcatcctgatgaaccagtccagtccgacattagcctactgtgctgacctgctgggt
ttggaccaggaagacctgagagtcagcctcaccaccagggtcatgctcacaacagcaggg
ggcgccaaaggaacagttatcaaggtgcctctgaaggtggaacaggcaaacaatgcccgg
gacgccctggccaaggccgtgtacagctgcctcttcgatcacgtggtcaggagggtcaac
cagtgcttccccttcaacacctcctccaacttcattggggtgctggatatcgctggtttt
gagtattttgagcacaacagctttgagcagttctgcatcaactactgcaatgagaagctg
cagcagttcttcaacgagcgcatacttaaagaggagcaagagctgtatcagaaggaggga
ctgggagtcagtgaagttcattatgtcgacaaccaggactgtatagacctggtggaagcc
aagcttgtgggcatcctggacattctggatgaagagaaccgcctaccactgcccagcgac
caacactttgcagaggccatccacagcaagcacaaagaccacttcagactgacggttccg
aggaagtccaagctggctgtccacaggaacgtcagagatgatgaaggattcatcgtcaga
cactttgccggagcagtgtgctacgagacgacccagtttgtagagaagaataatgatgct
ctccatatgtccttggagagcctggtgtgtgagtccaaggataagtttgtgagggagctt
tttgagaactccaacaacagcaaggactacaaacaaaaggctggcaaactcagctttatc
agtgtgggcaacaaattcaagacccagttgaatgtacttctggagaagcttcgcagcact
ggctccagcttcattcgctgtgtgaaacccaacttgaagatggtgagccaccagtttgaa
ggagcccagattctgtctcagctgcagtgttcaggcatggtgtcagtgctggacttgatg
cagggaggcttcccctcccgagctcccttccatgagctctacaacatgtacaaacagtac
atgcctgacaagctcacacgactggaccccaggctcttctgcaaggctttgttcaaagcg
ctggggctgaatgagaatgactacaagtttggtttgaccagagtgttcttccgccctggg
aagtttgcggagttcgaccagatcatgaagtcggacccggaccacctggcagagctggtg
aagaaggtcaaccagtggctggtcgtcagccgttggaagaaggtccagtggtgctccctt
tctgtcatcaaattgaaggagaagatgaagtatcgtgcctctgcccttgttaagattcag
aagaccgtccgcatgtggctctgtaagaagaaacataagccacgcgtcgacggcatggtg
aaggtgcgtaacctgaagatgcgtatggaacgcttcaacgaggtggtgggtgctctgaag
gagggcaagcaggagatggcccagcaggtccaggagctgggggcctccatcgacaccttc
atggccaatatcaaggccacagtgatgaccaggaaggagattgaccaggagtaccagggg
ctggtgaagagcttggagcagctgctctcctccatgcagaagaagaagcaggaggaagac
gagatggagaggttgcggcgcatcgaagaggagatggaaagagagaggaagaggagggag
gaggacgaccagcaacggcagcaggaggagaacgacagaaagaagaaatcagagatggag
cataagaggaagcaggaggaggaggagaggaagaggagggaggaagaaaagaagattatg
caggcggagatggacatccagatagcgctggagcgggaggaggacgtccagcgatcggcc
ttgttggagcaggagaggagagacagagagctggccatgaggatcgcccagagcgaagcc
gaactcatcaacgacgaggcccagatggaccccagtctgcgcagcaatgggtctttctca
ggtctctatccaaacacagtgagagccatgggttcacaggtgcaggcactcaaagccggt
ggcgtgaagaagtacgacctgagcaagtggaaatacgctgagctgcgggacgtcatcaac
acctcgtgcgatattgagctgctggcggcatgcagggaggagttccatcgccgtctcaag
gtctaccacgcctggaaatccaagaacaagaaacgtgacacagctgctgagcagagggcc
cccaaatctatcactgactacgcccaacagaatccggccccggccgtggccacccagcag
caggagatggccatgaaccgccagcagcgatacttccgcattcccttcatccggcccgct
gaccagtacaaggacccccagaacaagaagaagggctggtggtactcccactttgacggg
ccctggatcgccaggcagttggaactgcacccagacaagcagcccatcctgctggtggca
gggaaagacgacatggagatgtgtgagctaagcctggaagagaccgggctgacccggaag
agaggggctgagatcctgcctcggcagtttgaggagatttgggaacgctgcgacgggatc
acatacctgcgaaacgccatcgaaagcaagcaggccaggcccacgtatgccacagccatg
ctacagaacctcctccagtga
DBGET
integrated database retrieval system
