Oncorhynchus tshawytscha (Chinook salmon): 112262066
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Entry
112262066 CDS
T05605
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112262066
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112262066
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GFIT
Motif
Pfam:
STAR_dimer
KH-I_KHDC4-BBP
Quaking_NLS
KH_1
KH_KRR1_2nd
KH_12
Motif
Other DBs
NCBI-GeneID:
112262066
NCBI-ProteinID:
XP_042186103
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All DBs
Position
LG11:45682442..45829741
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AA seq
380 aa
AA seq
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MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLDRLLDEEINRVRKDMYND
TANGPIDKQPLELPEALGPIIHLQEKLFVPLKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDRKKEEQNRGKPNWEHLNEDLHVLITVEDTQKRAEIKMKRALEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDTNIKTHPLAFSLAAAAAAAQGPRLMQAPQGQLM
APHQQMRPPTPAGPPIMNIIRQPQMQGMLPNGTPTLVPPSPDGSILYASPYDYPYALAPT
SLLEYPIDHSGVLGKRPWGLGGGPFSPGQEGSLFYPGFLDAASMSQGQDLLKGAMATKMR
RHDSRVHPYQRIVDRAATGN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatggttggagagatcgaggtgaaggagagaccgaggccgagtcccgactatttgatg
caattgttaaacgaaaagaagctgatgaccagtttgccaaatctgtgcggtatctttaca
caccttgaccggcttctcgatgaagagatcaacagagtcaggaaagacatgtacaacgac
acagccaacggacctatagacaaacagcctctggaattacccgaggccctgggaccaatc
attcatctgcaggagaagctctttgtgcctctaaaagagtaccctgactataacttcgtg
ggcagaatcctggggcctcgtggactcaccgccaagcagctggaagcggagactggatgt
aaaatcatggtgcgaggcaagagctccatgagggacagaaagaaggaggagcagaacaga
ggcaagcccaactgggaacatctgaacgaggacctgcacgtcctgatcacggtggaggac
acacagaagcgcgctgagatcaagatgaaaagagccttagaggaggtcaagaagctcctg
gtgcccgcggcggaaggagaggataatctgaagaagatgcagctgatggagctggccatt
ctcaacgggacgtaccgagacaccaacatcaagacacacccccttgcgttctctcttgca
gcggcggccgccgccgctcagggcccccgtctaatgcaggccccccaggggcagttgatg
gccccacatcagcagatgaggccccccacaccggcagggccccccatcatgaacatcatc
cgacaaccccaaatgcagggcatgttacccaatggcaccccaaccctggtgcctccctcg
ccggacggcagcatcctctacgcctccccgtacgactacccgtacgccctggcgcccacc
tccctgctggagtaccccatcgaccacagtggggttctaggtaagcgaccctggggcctg
ggcggcggaccctttagccccggacaggagggcagcttgttttaccctgggtttttggac
gcggcttcgatgagccagggtcaggacttgttgaaaggtgcaatggctactaaaatgaga
cgacatgactcgcgcgtccatccttaccaaaggattgtagacagagccgccaccggcaac
taa
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