KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112262098
Entry
112262098         CDS       T05605                                 
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1
  KO
K10348  LRR-repeat protein 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112262098 (lrr1)
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     112262098 (lrr1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_14 LRR_1 LRR_LRWD1 LRR_9 LRR_R13L1-DRL21 LRR_Zer-1 UCH_N NoBody
Other DBs
NCBI-GeneID: 112262098
NCBI-ProteinID: XP_024293576
LinkDB
Position
LG11:complement(47596339..47602173)
AA seq 421 aa
MKLQCDVEVVNRMLPTYGMKNRGKGARSVLSIGRHVDKTTQRHNIYLMICTAKDRTGTKY
KLKENIETFFTRFVEEGKATVRLKEPAVDICLSKADANSLKNFLSAAQLAHRGNDMDSLP
LSTLTPVRARDVEKPKKKLTIVSKKDYPLTSNFPYSLEQLQVSYCKLSRVDMRMLSLKAL
RRLDLSNNNIKKLPDTIGDLGCLAELILHNNHLEAFSEALCLSSLQRTLQHLDLSQNRLQ
ALPPHFCQLRELINLKMDNNGLMWLPFRISHLSKLRFLSAAHNQLALLPGDFRKLNLENL
DLFGNPFAHPNPLDHTIQLTFPLTLQEMAARAVANLRIPYGPHLIPAHLCQDLEVAKTCD
CGCTCVNYYIKTAVSMNLHLVSHTVVLVDDMGGTDAPVQHHFCSLSCYSEFLDQCLQRGL
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagcttcagtgcgacgtcgaagtcgtgaaccggatgcttcccacgtatgggatgaaa
aacagaggaaagggagcaaggtctgtgctgtctattggaagacatgtggacaagaccaca
caacgccacaacatttatctaatgatctgtacagcaaaggataggacagggacgaaatat
aagctaaaagaaaacattgaaacattcttcaccaggtttgttgaggagggcaaagccact
gtgagactgaaggagcccgctgttgacatctgcttgagcaaggctgatgctaacagcttg
aagaacttcctctcggctgctcagttggctcacagaggaaatgacatggacagcctgcct
ctctctacactgacgcccgtccgagccagggatgtggagaagcccaagaagaagctgact
attgtatccaagaaagactatccattgacctccaattttccctactcattagagcagctc
caggtgtcctactgcaagctctcacgggtggacatgcgaatgctctccctcaaggcactg
cgcagactggacctcagtaataacaacataaaaaaacttcctgacactatcggtgacctg
ggctgcctggctgagcttattctccacaacaaccacttagaggcctttagtgaagccctc
tgcctgtccagcctccagcgcacacttcaacacctcgacctgagtcagaaccgcctgcag
gccctgccgcctcacttctgccagctgcgagagctgatcaacctcaagatggacaacaac
ggactgatgtggctgccttttcgcatcagccatctctctaagctgcgctttttgtcagct
gcacacaaccagctggccctgctgccaggggacttccgaaagttaaatctggagaacctg
gacctgtttggtaatccgttcgcccatcccaaccccctggaccacaccatccagctcacc
ttccccctgacactgcaggagatggccgccagggctgtggccaacctcagaatcccgtac
gggcctcatctcatccctgcccacctttgtcaagacctggaggttgccaagacctgtgac
tgtggctgtacctgtgtgaactactacatcaaaacagcagtcagcatgaatctgcatctg
gtgtctcacactgtggttttggtagatgacatgggaggaacagatgcaccggtgcagcat
cacttttgctccctatcatgttactctgagtttctagaccaatgccttcagcgaggcctg
agatga

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