Oncorhynchus tshawytscha (Chinook salmon): 112262106
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Entry
112262106 CDS
T05605
Name
(RefSeq) transcriptional repressor protein YY1-like
KO
K09201
transcription factor YY
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112262106
03083 Polycomb repressive complex
112262106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112262106
03036 Chromosome and associated proteins [BR:
otw03036
]
112262106
03029 Mitochondrial biogenesis [BR:
otw03029
]
112262106
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112262106
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
112262106
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112262106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
C2H2_ASCIZ
DUF4114
IBR
Raffinose_syn
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
112262106
NCBI-ProteinID:
XP_042186132
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Position
LG11:complement(47905327..47911083)
Genome browser
AA seq
355 aa
AA seq
DB search
MASGDTLYIETDGSEMPSEIVELHEIEVETIETTVVGEDDDEQPMIALQPLDSDDPHSMH
HHHQEVILVQTREEVVGEDDSDMHGDDDYEDQILIPVPVPAAEEEYIEQTLVTVAGKSSG
RTKKGGSGKRNKKNYLGAPESSGRKWEQKQVQIKTLEGEFSVTMWASDDKKDVDHDTMVE
EHVIGDNSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDSPRTIACP
HKGCSKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG
CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtgataccctgtacatcgaaactgacggctcggagatgccgtcagaaata
gtagaactccatgaaatcgaagtggagacaatcgagacaacagttgttggagaggacgac
gatgaacagcctatgatcgctttacagcccctcgactcagatgatccacactcaatgcat
caccatcatcaggaggtaatattggtgcaaactcgagaagaggtggttggtgaagatgat
tcggacatgcacggggacgatgattacgaggaccaaattctcatacctgtcccagtccct
gccgccgaagaggaatacatcgaacagactctggtgactgtcgctgggaagagctcgggg
cggacgaagaaggggggaagcgggaagagaaataaaaagaactacttgggtgcaccggag
tccagtggtagaaaatgggaacagaaacaagtccagataaagactttggaaggagagttt
tcggtgacgatgtgggcatcggatgacaagaaggatgttgaccatgacactatggtagag
gagcatgtcattggggataattctcctcccgattactcggagtacatgacagggaagaag
ctcccgcctggaggcattccaggcatcgacctgtcagaccccaaacagctggcagagttc
gctaggatgaagccacggaaaatcaaggaggacgactctcccaggacgatagcttgccct
cacaaaggatgcagtaaaatgttcagggataactctgcaatgagaaagcacctgcacacc
cacggaccacgtgttcacgtctgcgccgaatgtggaaaggcctttgtcgaaagctccaaa
ctgaagaggcatcaacttgttcataccggcgagaagcctttccaatgcacatttgagggc
tgcggaaagcggttctccctggactttaacttacgcacgcacgtgcggattcacactgga
gaccgaccctacgtctgtccgtttgacggctgcaacaagaagtttgcccaatccaccaac
ctcaagtctcacatcctcacacacgctaaagctaaaaacaatcagtga
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