Oncorhynchus tshawytscha (Chinook salmon): 112262171
Help
Entry
112262171 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: centrosomal protein of 170 kDa protein B
KO
K16463
centrosomal protein CEP170
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112262171
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112262171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CEP170_C
FHA
Motif
Other DBs
NCBI-GeneID:
112262171
NCBI-ProteinID:
XP_042185985
LinkDB
All DBs
Position
LG11:35152928..35173960
Genome browser
AA seq
1806 aa
AA seq
DB search
MSVTSWFLVSSSGTRHRLPPEMIFVGREECELMLQSRSVDKQHAVVNYNPATDEHMVKDL
GSLNGTFVNDLRIPDETYITLMLSDVIRFGYDSHVYILERSQHKVPEEALKHEKYTSQLQ
MSMKALEARKKEKERQHVKEKTRDSSCFKQEKAEHKAALAAVASETPVSRPTPLYGQPLW
WGEDDAEHSGGQRPDEDPAENTKEGSRHEISGSLSDSQAKTIYSHHREPSYFEIPTKEFQ
QQELHEVPTKDTDPPSLPVPVLPPVPTSTPPVVQSHASFTIEFDECTPSKIKIKDHVTKF
SFRQQRKLPGKEAVTAPTEVISAECKVADWLVQSDVSMMRRRSRTEDMFSSKSGLPICNE
ASTGHHHEDGTWSDSEDPVVNGKRAIQLKPPMGPHKSLPPQLALPRPFTNPDSADPQSHS
PPPSQDKADPQQGFVIEFFDDNPRKKRSQSFTNNTGQLDSPALRNKPEKRCDPSTPTQQY
TIPLKGPGSGGPQRAGSLRREKMEDRISNNISSCSIPPRLFRSVGRRSKLAQDFTAEFLR
ESRQESRPSMNTTWEKNTSPVSPTTSPPPTVEAIAPHSHPHQTTPSPLSHTTQTSSCTHQ
SVPLKAPLMPMAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEA
PRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEA
PRSLEAPRSLEAPRSLEAPRSLEAPRSLEAPRSLEATSPKGLGNEEDDTLSEAGTYTIDT
EVQDKEVEEARSKIEQVFGVVEGPEQPSQTAAAACKPVEFQDREERRESSLVDLMPAPGQ
GQNLVQVPGGSKWVSCWASLADSYTHSGPASGLFEIPLQMDLSGGVGGRTVHQATLSRNI
NSVESEGPSYKTQRIPSQAPSMENNETPTPSILIHQDTYSTYDIKERSFRVLGPQEDLHN
LSVQDDLDQDSLSDASKSDDCSIVEQRKMPTPERTDKSTSQSSEKERPTLPAKSTSFYIC
SKESVSKQERGSRPNTPRIERKPPPHPNTPQFSTATLTKQQGGQEFQKTVKLNSSAPKLD
YQGRVSPEPNEISVSLVRQESFIKDQPSDAAVTRLPHISSQPALNDPDPAEAFQGVCSQD
THSYLNGTEDALAALAAKLQAQPPDVVPRPIDYSLSGESDMDSASTASLRNNQTAPKTGS
KKPLFTSGLQRERSSASSFTQEPSRQQSAFDRLSEKRRSQRVDSSRKPEQDRRLGMRCCV
VKHGTMDLSDDPQSFSLPYWPETISSDQAVPRPAACKKYTVPLQKEEPTKSSKVAQALSR
SNSMSAPRPTRASMLRRARLGEASDNEVTETDRISQNSQEVSGTSKASQDSKKQLSRLDM
LALPRKRTSSFTTPSDTESSAPRTGFSNRSTESNSGSGLKDSVAGPSTKPALGRASGASG
KLITRFRSSSAKYTSSTASSRRRQKGSDYTSTSEEEFDSIQSTLKHKRSHTPSASRSQPL
IPPRPKPRSQDSDQESHEGDAYQNCSSHSAEIARLSQDLAKDLSVLAREIHGVTGDADPQ
SSSAVEANTPVSTITAREVLVHPIPEAGVNYLRVPPGSAAARDPDQTIMNDQEYNSKHRG
WNQEVVVVDDLMLNPVSQISLAIRENTEQLAEKIKVLFHNKTDVWGEIESKLNTENDIPV
LKGSNKEITAILKELRRVQRQLEVINTIIEPSGNLEPAKASTPSAASTPSAASTPSAPST
PSAPSTPSAPSTPSAPSSAGLKPSRAPSRYWRTSGSQRGGVPSSSSRPSESVRRSVVASE
AESYVV
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacgtcatggttcctggtcagcagctcaggtacaagacatcggttgccacca
gagatgatctttgtaggccgggaggagtgcgagctcatgttgcagtcgcgcagtgtggac
aagcagcatgcagtcgtcaactacaaccccgccacagacgagcacatggtgaaggacctg
ggcagcctgaacgggacttttgtgaatgatctgagaatcccagatgagacttacattacc
ctgatgctctctgatgtcatccgctttggatatgattctcatgtgtacatcctggagagg
agtcaacacaaggtgccagaggaggctctcaaacatgagaagtacaccagccagctgcag
atgagtatgaaggcactggaggcaaggaagaaggagaaggagaggcagcatgttaaggag
aagaccagagactcatcctgcttcaaacaggagaaagccgagcataaagctgccctcgca
gcagtggccagcgagactccagtgtccagacccactcctctgtatgggcagccgttgtgg
tggggggaggatgatgctgaacacagtggaggacagcggccagacgaggaccctgcagag
aatactaaagagggctccagacatgagatcagcggctccctgtcagacagccaggccaag
acaatctactcgcaccacagggagccaagctactttgagatacccaccaaggagttccag
cagcaggagctccatgaggttcccactaaggacactgaccccccttctctccctgtccct
gttctccctccagtccccacctccacaccccctgtggtgcagagccacgcctccttcacc
attgagtttgatgaatgcacaccaagcaagatcaagatcaaggaccatgtgacaaagttt
tccttccgccagcaacgcaagctcccgggtaaggaggcggtaacagcgcccactgaggtg
atatcagctgagtgcaaggtggctgattggctggtccaaagcgatgtgagcatgatgagg
aggaggtctcggacagaggacatgttcagctcaaagagtggcctgcccatctgcaacgag
gcttccacaggccaccaccatgaggatgggacttggagtgactctgaggatcctgttgta
aacgggaaacgggctatacaattaaagccaccgatgggccctcacaaatctctaccaccc
cagctggccctccctagacccttcaccaaccctgactcagcggatcctcagtctcactcc
cctcctccaagccaggacaaagcagacccccagcagggcttcgtcattgagttctttgac
gacaatccacgcaagaagcgctcacagtccttcaccaacaacacaggccagctcgacagc
ccggccctcaggaacaagccggagaaaaggtgcgaccccagcacccccacccagcagtac
accattcccttgaagggcccgggttctggaggcccccagagggctggctccctgaggagg
gagaagatggaagatcggatcagtaacaacatctcctcctgctccatccctcccaggctg
tttagaagtgtgggacgcaggtccaaactggcccaggacttcacggctgagttcctgagg
gagtccagacaggagtctaggccgagcatgaacacaacctgggagaagaatacgtctcct
gtgtctcctaccaccagccccccaccaacagtagaggcaatagcaccccactcccacccc
caccagaccacaccaagccccctcagccataccactcagacttcatcctgtacccaccag
tctgtgcccctgaaagcccctctaatgcccatggccccacgcagcctggaggccccacgc
agcctggaggccccacgcagcctggaggccccacgcagcctggaggccccacgcagcctg
gaggccccacgcagcctggaggccccacgcagcctggaggccccacgcagcctggaggcc
ccacgcagcctggaggccccacgcagcctggaggccccacgcagcctggaggccccacgc
agcctggaggccccacgcagcctggaggccccacgcagcctggaggccccacgcagcctg
gaggccccacgcagcctggaggccccacgcagcctggaggccccacgcagcctggaggcc
ccacgcagcctggaggccccacgcagcctggaggccccacgcagcctggaggccccacgc
agcctggaggccccacgcagcctggaggccccacgcagcctggaggccacaagccccaaa
ggcctggggaacgaggaggatgataccttgagtgaagcaggcacctacaccattgataca
gaggtccaggataaagaggtggaggaggcacgcagcaagatagaacaggtgtttggtgtt
gttgaggggccagagcagcccagccagactgcagcagcagcatgtaagcctgttgagttt
caggacagggaggagcgtagggagagtagcttggtggatctgatgccagctccagggcag
ggacagaatctggtgcaggtacctggtggctctaagtgggtgtcttgctgggccagcctg
gcagacagctacacacactctggccctgcctcaggcctcttcgaaatccccttacagatg
gacctgtcaggaggagttggtgggaggaccgtccatcaggcaacgctcagtcggaacatc
aatagtgtggaatcggaaggcccgagttacaaaacacagcgtattccttctcaggcacca
tcgatggaaaataatgagactccaactcccagcattcttatccatcaggacacttactct
acctatgatatcaaagagaggagcttcagagtccttggaccacaggaggacctccacaac
ctgtctgtacaggacgaccttgaccaagacagcctgagtgatgccagtaagtcagacgac
tgctccatcgtggagcagaggaagatgcccacaccagagaggacagacaagagtacatct
cagagcagtgaaaaggagaggcccacactcccagccaagtctacatcattctacatttgc
tctaaggagagtgtgtctaaacaggagcggggatccagacccaatacacccaggattgag
agaaaaccaccaccacatcccaacacaccacagttctccacagccaccctgaccaaacaa
cagggtggacaagaatttcagaagacagtcaagctcaactcatcagctcccaagcttgac
taccagggcagagtcagccctgagcccaacgagatctcagtgtctctggtcaggcaggag
agtttcattaaggaccagccaagtgatgctgcagtcaccagactcccacacatctccagc
cagcctgctctgaatgaccctgaccctgctgaggcgttccagggtgtttgcagccaggac
acccactcctacctcaatgggaccgaggatgctctggctgccctggcggccaagctccag
gcccagccgcctgatgttgttcctcgccccatagattactctctgtctggggagtctgac
atggactcagcgagcactgccagcctgcgcaacaaccagactgcccccaagactggatcc
aagaagcccttgttcactagtggccttcagagggagaggtcctctgccagctccttcacc
caggagcccagtcgccagcagtcagccttcgatcgcctgtctgagaagcggcggtcccag
agagtggacagcagcaggaagcctgaacaagacaggaggctgggaatgagatgctgtgtt
gtaaaacatggcaccatggacctgagtgacgacccccagagcttcagcttaccctactgg
cctgaaaccatctcctcagaccaggcggtcccccggcccgctgcatgcaagaagtacacc
gtccccctgcagaaggaggaacccactaagtcctccaaagtggcccaggccctaagccgc
tccaacagcatgtctgccccacggcccacaagagcttcaatgcttcgccgggctcgcctg
ggcgaggcatccgacaacgaggttacagagacagacagaatctcccagaactcccaggaa
gtcagtgggacctccaaggcctcccaggacagtaagaagcagctctccaggctggacatg
ctggctctgccccggaagaggactagctccttcaccactcccagtgatacagagtcctca
gcacccaggacaggcttctccaaccgcagcacagagtccaacagcggctctggccttaag
gactccgtggccgggcccagcactaagcctgcgctaggcagggcctctggagcttcaggc
aagctcatcacccgcttccgctccagcagtgccaaatacaccagcagcacagccagctct
agacgacgacagaaaggctctgactacacctccacctccgaggaggaatttgactctatc
cagagcacccttaaacacaaacgctcacacaccccctcagcttcccgctcccagcctctc
atccccccacgccccaaaccccgctcacaagactcggaccaggagagtcacgagggagac
gcctaccagaactgttcctctcacagtgctgagatagcaagactgagtcaggacctggct
aaagatctatccgtcctggccagggaaatccatggtgtgactggtgatgctgatcctcag
agctcttctgcagtggaggccaatacacctgtctctaccatcaccgccagggaggtgttg
gtccatcccatcccagaagctggtgtgaactaccttagagttcctcctggatccgctgca
gccagggaccccgaccaaaccattatgaatgaccaggaatacaactctaagcacagagga
tggaaccaggaagtggttgttgtggatgatctgatgttgaatccagtgtcccagatctct
ctggctattcgagaaaacacagagcagctagctgagaaaataaaggtactattccacaac
aaaactgacgtttggggggagattgaatcaaagctcaatactgaaaatgacatcccggtc
ctgaaaggctcaaacaaggaaatcacagctattctgaaagagctcagaagagttcagaga
caacttgaagtcatcaacactatcattgagcccagtggaaatcttgagccagccaaagcc
tccactcctagtgccgcctccactcctagtgccgcctccactcctagtgccccctccact
cctagtgccccctccactcctagtgccccctccactcctagtgccccctcctcagccggg
ttgaagccatccagggccccttcgagatactggagaacctcgggttcccagcggggtggg
gttccctcttccagctctaggcccagtgagagtgtcaggagatcagttgtggcctctgag
gcagagagctacgtggtctga
DBGET
integrated database retrieval system
