Oncorhynchus tshawytscha (Chinook salmon): 112262210
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Entry
112262210 CDS
T05605
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112262210 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112262210 (nup107)
03036 Chromosome and associated proteins [BR:
otw03036
]
112262210 (nup107)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112262210 (nup107)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112262210 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
NACHT
Motif
Other DBs
NCBI-GeneID:
112262210
NCBI-ProteinID:
XP_042172149
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MDWDQNELLSPIVRDAEVTRAARRKSSVQKKAQFNFLSPRDDNQGSTTTPARSLPCHTPG
SLFKQSFTPKSAARNPDVSAILATGRRTPRFIHTPRPPLGSMSMNLDDSDWTNSLYPSPL
SGLGLGDTSFTDDINMSSVMLKEEDPGEAASVSLFPEFLQSYLRHSSTAVFDLLGEYEAI
CQDKVGMLQRLVSRAAPGQQKSSKTAGMRWLLQQEMVTWRLITSLYRDRIQSELEDDIMM
DVAAPGVSEKVVMEQLFQRDAVVRQSQLVVDWLESIAKDEIGDFSDNIEYYAKSVYWENT
LHALKLRRNTSSTGFNVPLVTELDPDAPIRQRRPLADLDREDDARLLKYLFTLLRAGMTD
EAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGAELLPVEGNPQRCVWKVCCWRMADSEH
FSRYERAIYAVLSGNLKRLLPVCESWEDSVWAYFRVLVDSLVEQEVRSSGMGSEELEELP
REYLEANWTLEKVFEELLATESKKVLEETKEHYHIIQKLVILGDLDGLLEEFSNWLTRSP
ALPSHLLRFMTHLVLFYRSLGMQLKEEVSVDVLKAYISLLMREKYVDLIAFYVSHLPPDL
ATAQYALFLEEVTEAEQRQRCLELAREAGLDVAAVTKMVVENIRERDTEEFAHHDLTPAL
DTGTSAEDQRKIDVIDWLVFDPAQRAEALKQSNAIMRKFLACKKHHAAKVVFGKVPEDSM
REIYRQWEELGLDMPLPAEDENAIREHLCVRAYLEAHEAFNEWFHHMNSPPQKPSLPAQA
KFTEKVAYEMKENEYQLEHDSWTGRLEALTEDVKERIYNVLLFVDGGWMVDVREDTEEDP
ERGHQMVLLRRLCLPMMSFLLQTVLQRTQRHQESLRLADIIASDQHRLYEVFSKDELRKF
LQKMRESSLLLLDKGLDPLGYEIQP
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccagaatgagttgctgtcgcctattgtacgagatgccgaagtgaccaga
gcagcacgccgaaagagttcagttcagaagaaggctcaattcaacttcctttctcctcgt
gatgacaaccaaggtagtaccaccacacctgcccgttccctgccctgccacacacctgga
tccctcttcaaacagtccttcaccccgaagagtgctgctaggaacccagatgtgtcggcc
atcttggcgacagggcgcaggactcctcgtttcatccatacgccacgacctcccctgggc
agtatgagcatgaacctggatgacagtgactggaccaacagcctgtacccgtctcctctg
tccggcctgggactgggggacaccagctttactgacgacatcaacatgtcctctgtaatg
ctgaaggaggaggatcctggagaggctgcgtcagtcagtctgttcccagagttcctccag
tcctatctcagacactcctccactgcagtctttgacctgctgggggagtatgaagccatc
tgtcaagacaaggtgggcatgctccagaggctggtatcgagggcagctccagggcaacag
aagtcctctaagactgctggtatgagatggcttttacagcaggagatggtcacctggcgc
ctcattacttctctatacagagacaggatccagtcagagctggaggatgacatcatgatg
gatgtggctgctcccggtgttagtgagaaggtggtgatggaacaacttttccagagagat
gctgtagtacgccagagtcagttggttgtggattggttagagagtatcgccaaagatgaa
atcggggacttctccgacaacattgaatactacgccaagtctgtctactgggagaatacc
cttcatgctctgaaactgagaagaaacacctccagcacaggcttcaatgttcccctggtt
actgagctggaccctgacgcccccatcagacagagacgtcccctggcagacctggacaga
gaggatgatgccagactgctgaagtacctcttcaccctcctcagagcgggcatgactgac
gaggcccagaggctgtgtaagcgctgtggccaggcatggagagctgctactctggaggga
tggaagctgtaccacgaccccaacatcaacggaggaggtgcagagctgctaccggtggag
gggaaccctcagcgctgtgtgtggaaggtctgctgctggaggatggctgatagtgaacac
ttcagcagatatgagagagccatctacgctgttctgagtgggaacctcaaacggctactc
ccagtgtgtgagtcgtgggaggacagtgtgtgggcctacttcagggtcctggtagactct
ctggtggaacaggaggtccggtcctcagggatgggcagcgaggagctggaggagctgcca
cgagaatacctggaggccaactggacactggagaaggtgtttgaggagctgctggcaaca
gagtcaaagaaagtcctggaagagacgaaagaacactaccacataatccagaagttagtt
atcctgggtgacctggacggtctgttggaagagttcagtaactggttgaccaggagtcct
gctctgccctctcacctgctgcgcttcatgacacacctggtgttgttctaccgtagtctg
ggcatgcagctcaaggaggaggtatcagtggatgtcctgaaggcctacatctctctgttg
atgagggagaagtacgttgatctgatagccttctatgtcagtcacctgccgccagacctg
gccaccgcccagtacgctctcttcctggaggaggtcaccgaggctgagcagagacaacgc
tgtctggagctggccagggaggcaggtctggatgtggcagcggtcactaagatggtggtg
gagaacatcagagagagagacactgaggagttcgctcatcatgacctcacccctgcactg
gacactggcacctcagcggaggaccagaggaagatcgatgtgattgattggctggtgttt
gaccccgcccagagagctgaggccctcaaacagagcaacgccatcatgaggaagttcctg
gcctgtaagaaacaccatgcagctaaggtggtgttcggtaaggtccccgaggactccatg
agggagatctaccgccagtgggaggagctaggcctggacatgccccttcccgcggaggat
gagaacgccatcagggaacacctgtgcgtccgcgcttacctggaagctcatgaggcgttt
aatgagtggttccatcacatgaactccccacctcagaagcccagcctgccggctcaggcc
aagttcactgagaaggtggcctacgagatgaaggagaacgagtaccagctggaacatgac
agctggaccggccgtctggaggctctgactgaagacgtgaaggagaggatctacaacgtc
ctgctgtttgtggacgggggctggatggtcgatgtcagagaggatacggaggaggaccca
gagagaggccaccagatggtgctgcttcgtagactctgtctgcccatgatgtccttcctg
ttgcagacagtactgcagagaacacaacgccaccaggagagtctcagactggctgatatc
atcgcctcagaccaacaccgcctctacgaggtgttctccaaggatgagctgaggaagttc
cttcagaagatgagggagtcgtctcttctcttattggataagggtctagacccgctgggg
tacgagatccaaccataa
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integrated database retrieval system
