Oncorhynchus tshawytscha (Chinook salmon): 112262219
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Entry
112262219 CDS
T05605
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112262219
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112262219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112262219
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Others
Platelet activating factor
112262219
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Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
CitMHS
Bac_export_2
Motif
Other DBs
NCBI-GeneID:
112262219
NCBI-ProteinID:
XP_024293686
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Position
LG11:45168639..45173669
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AA seq
370 aa
AA seq
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MEMEEDMTVNLSTVGKITFLDSEFRYTLFPVFYGVVFVLGLIANSYVLFVLQRLRNAKAM
NEIRIYMANLTVADLLFVCALPFWIGYYHHCGDWRYGDFLCRITGSFFFINTYCSILFLA
AISVNRYWAITRPLDAASSDHWRRGVAVTMVIWVLTLSMSVPYLLETGIQVDDGNVSRCF
EGYHDKTDDEKRTVATTHLIIVGCFILVFFLVVICNLLIARALLTQSPTQTRGSSSSQLR
GVKGQALQMLCAVVGVFVVCFLPHHVVQGPWTLAVLDIKEGWGRMDWGQRTRQWLNDAHQ
VTLMLMGLNCLLDPVVYCFATRKFRLYIKDNLKKVGRGKGCSETAITHISMVECKNVSQR
LHSEQQQLKV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagaggacatgacagtgaacttatcgacagtcggtaaaataacctttctg
gactctgagttccgttacaccctcttcccagtgttttacggtgttgtgttcgtccttggt
ctgatagccaacagttacgtgctgttcgtgctgcagcgcctgcgcaacgccaaggccatg
aatgagatccgcatctacatggccaacctgactgttgccgacctcctcttcgtgtgcgcc
ctccccttctggattggctactaccaccactgcggtgactggcgctacggcgacttcctg
tgccgcatcaccggctcgttcttcttcatcaacacctactgctccatcctcttcctcgcc
gccatcagcgtcaaccgttactgggccatcacgcgcccgctggatgccgcctcgtctgac
cattggcgccgcggagtggctgtcaccatggtaatctgggtgctcactctgtccatgtcc
gtgccgtacctcttggagacgggcatccaggtggacgacggcaacgtgtcgcgctgcttc
gagggctaccatgacaagactgacgacgagaagcggactgtggccaccacccacctcatc
atcgtggggtgcttcatcttggtcttcttcctcgtagtaatctgtaacctgctcatcgcc
cgtgccctgctcacccagtcccctacccagactcggggctccagttcatcccagctccgg
ggggtgaagggccaggccctgcagatgctgtgtgccgtggtgggggtgtttgtggtgtgc
ttcctcccccaccacgtggtccagggcccctggactctggctgtactggatatcaaggag
ggctggggcagaatggactggggccagcggaccaggcagtggcttaacgatgcccaccag
gtcaccttgatgctgatggggctcaactgcctcctggatcctgtggtgtactgctttgcc
accaggaagttccgcctgtacatcaaggacaatctgaaaaaggtggggaggggcaaagga
tgctcggaaacagccatcacacacatttctatggtggagtgcaagaatgtgagccagcgg
ctccatagcgaacagcagcagctgaaggtttaa
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