Oncorhynchus tshawytscha (Chinook salmon): 112262241
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Entry
112262241 CDS
T05605
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262241 (atl1)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112262241 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
112262241 (atl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
112262241
NCBI-ProteinID:
XP_042186220
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All DBs
Position
LG11:complement(51257988..51294444)
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AA seq
564 aa
AA seq
DB search
MARNREDRDSWGSFTDKATYDWSSEEEEPDGSARPIQVLVVKDDHTFELDEAALSRILLA
EEVQNREVVAISVAGAFRKGKSFLMDFMLRYMYSQATEEWLGEAEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFINNLQV
LVPWLLSPRNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAARDLYNKKMEQVCGGDRPFLAPAELQARQSDIREEALQVFRGVKKMGGEEFSRRYLL
QLEGEVDEAFVQYIKHNDSKNIFHAARTPATLFVVIFSMYVMAGITGFVGVDIIASVCNM
ILGLALITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYTAAASHRHLYH
HAFPGPQASGETSDTHEEPTRKRN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaccgtgaagatagagacagctgggggtccttcacagacaaagccacctac
gactggagctcggaggaggaggagcctgatggaagtgcgcggcccatccaggtgctggtt
gtcaaggacgaccacaccttcgagttggacgaggcggcgctgagccggatcctattggcc
gaagaggtccagaacagggaagtagtggccatatctgtggctggggcgttccgcaagggc
aagtcattcctcatggacttcatgctgcgttacatgtacagccaggcaactgaagagtgg
ctgggggaggcagaggagcctctgactgggttctcctggaggggtggatctgagagagag
accactgggattcagatctggagcgaagtctttctggtggacaagccagatggacgcaag
gtggctgttctactgatggatactcagggcacgtttgacagccagtcgacgttgagggat
tcagccaccgtgttcgcacttagcaccatgatcagctccatgcaggtgtacaacatctcc
cagaatgtccaggaggatgatcttcaacacttgcagctcttcactgagtatggtagactg
gccatggaggagacattcctcaagccattccagtccatgatattcctagtccgggattgg
agtttcccttacgagtttggctatggacaggaaggaggcatgaagttcctggagaagagg
ctcaagatctcagagaaccaacatgaggagctgcagaacgttcgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaagtggccaccaac
cccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaacaacctgcaggtg
ctggtcccgtggctgctgagtcccaggaacctggatgtcaaggagatcaacggcagcaac
atcacctgcagaggcctgctggagtacttcaaggcatacatcaaaatctaccagggtgag
gagctgccacaccctaagtccatgctgcaggccacagcggaggccaacaacctggcagca
gtggcagcagccagggacctgtacaacaagaagatggagcaggtgtgtggtggggaccgg
cccttcctggccccggcagagctccaggccagacagagtgacatcagagaggaagccctg
caggtgtttcggggggtcaagaagatgggaggggaggagttcagccgacggtacctgcta
caactggagggagaagtggacgaggcgttcgttcaatacatcaagcacaacgactccaag
aacatcttccacgccgcccgcaccccggccacgctgttcgtggtcatcttcagcatgtac
gtgatggcgggcatcacaggcttcgtgggggtggacatcatcgccagcgtgtgtaatatg
attctgggcctggcgttgatcaccctgtgtacctgggcttacatacgctactctggggag
taccgagagctgggtcaggtcatcgaccaggtggctggagccctctgggaccagggaagc
acaaatgaggctctatataagctgtatactgctgcagccagtcacaggcacctgtaccac
catgcgttccctggcccccaggcctctggagagacgagcgatacccacgaggaacccacc
aggaagaggaactga
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