Oncorhynchus tshawytscha (Chinook salmon): 112262294
Help
Entry
112262294 CDS
T05605
Symbol
foxa1
Name
(RefSeq) hepatocyte nuclear factor 3-alpha
KO
K09387
forkhead box protein A1, hepatocyte nuclear factor 3-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112262294 (foxa1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
112262294 (foxa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Forkhead
Forkhead_N
HNF_C
Motif
Other DBs
NCBI-GeneID:
112262294
NCBI-ProteinID:
XP_024293745
LinkDB
All DBs
Position
LG11:complement(22208604..22211637)
Genome browser
AA seq
435 aa
AA seq
DB search
MLGTVKMEGHETPDWSSYYNDAQEVYSPMVNNGMNAGLSSMNNMNSYMSMSTNGNMTSGS
FNMSYANPGLGAGLSPGTMTGMPPSASSAMNGMGGGVPLMGTALSPSNMGAMSAQQASMN
AMNPYASMSPTMSPMSYTQPNLNRARDNKSFRRSYPHAKPPYSYISLITMAIQQAPSKML
TLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVSRSPDKPGKGSYWALHPDSG
NMFENGCYLRRQKRFKCENRKISSSKGDGRKDQSGSGSPSSENTNSKTGNVDSNSLSNQS
SSPHSMDHRSSGSASELKSSGPPLHPVASSATSLSSLPLPPHSMAHESHLHLKGDPHYSF
NHPFSINNLMSSSEQQHKLDLKAYEQALQYSSYGSSMSSSLPLGSASMVGRAMDPSAIEA
SYYQGVYSRPVLNTS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtacagtgaaaatggaaggtcacgaaacgccagattggagcagctattacaat
gacgcacaagaggtatattcgcccatggtgaacaacggcatgaatgcaggactgagttcc
atgaacaatatgaacagttacatgagtatgtctactaatggaaatatgacctcaggttct
ttcaatatgtcttacgccaaccccggcctgggagccggactaagccccgggacaatgaca
gggatgcccccgagcgcgtccagtgcgatgaacggaatgggtggaggggtaccgttaatg
ggcactgcccttagcccctcgaacatgggcgcgatgtcggctcagcaggcttccatgaac
gctatgaatccatacgcgagcatgagccctactatgagcccaatgtcctatactcagccc
aacctgaaccgagcaagggacaacaagtcgttcaggagaagctacccacacgcaaagcct
ccgtattcatacatatccctcataaccatggccattcagcaagcaccaagcaagatgctc
acgcttagcgaaatctatcagtggataatggacctattcccatactacagacagaaccaa
cagaggtggcagaactctattcgccattccttgtcttttaatgattgcttcatcaaagtg
tctaggtcaccggataagccaggcaaaggttcgtactgggccctgcacccagattcagga
aatatgttcgagaacggttgttacctacgcagacaaaagcgctttaaatgcgaaaataga
aagatatcttcaagtaaaggggacggaaggaaagaccagtccggttctggatcgccttcg
agcgagaacaccaacagcaagactgggaatgtggactccaactccctctccaaccagtcc
tccagccctcacagcatggaccacaggagcagtggcagcgcctctgaactaaagagcagc
gggccacctctccaccccgtggccagctcggccacgtccctgtcctctctccctttacct
ccgcactcgatggcgcacgagtcccatctgcacctaaaaggggatccccattactcattc
aaccacccgttttcaataaataatttaatgtcatcctcagagcaacagcacaaactggat
ttgaaagcctacgagcaagctttgcaatactcttcctacggctcaagtatgtcttccagt
ctacccctcggcagcgcgtccatggtaggcagagccatggacccatccgcaatagaggcg
tcatactatcaaggtgtgtattccagaccagtcctcaacacttcttag
DBGET
integrated database retrieval system