Oncorhynchus tshawytscha (Chinook salmon): 112262335
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Entry
112262335 CDS
T05605
Name
(RefSeq) collectin-11 isoform X1
KO
K10066
collectin sub-family member 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112262335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262335
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
otw04091
]
112262335
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Opsonins
112262335
Lectins [BR:
otw04091
]
C-Type lectins
Group 3: Collectins
112262335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
112262335
NCBI-ProteinID:
XP_024293774
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All DBs
Position
LG11:complement(43947356..43954962)
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AA seq
277 aa
AA seq
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MRAEELMPCVLITLLGLTLMESTHGQHMSDEPCSVQILVPGLKGEPGEKGEKGAPGRPGR
LGPLGEMGHTGVKGHKGIIGRYGKMGPCGIKGLKGDMGDPGPMGLSGDPGVPCECTPLRK
MIGEMDILVAQLSNEMKFIKTALPSPAAVAGIKETDSKVYLLVKEEKCYTDAEVYCQGRG
GHLAMPKDEGANAAIAGYITEAGLSRVYIGINDIDREGHFTYVDRSPMSTFSKWREGEPN
NAYRDEDCAEMMAAGDWTDVACHPTMYFVCEFDKDIV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagaggagctgatgccttgtgttcttatcactctgctggggctgaccctgatg
gagtcaactcatggacagcacatgtcagatgaaccctgctccgtccagatcctcgtccca
ggactcaaaggagagccaggagaaaagggagagaaaggggcacctgggagaccaggaaga
ttgggtccactaggggagatgggacatactggagttaaaggacataagggtattatagga
cgttatgggaaaatgggcccctgtggaatcaaaggtttaaaaggagatatgggggatcct
gggccaatgggcctgagtggtgatccaggtgttccatgtgaatgcacacccctgaggaag
atgattggtgagatggacatcctagtggcccagttatccaatgagatgaagttcatcaaa
actgcactgccctcccctgcagctgtcgccggcatcaaagagaccgacagtaaggtctat
ctactggtcaaggaggagaaatgctacaccgatgcagaggtctattgtcagggaaggggt
ggacacttggccatgcccaaggacgagggggccaacgcagccatcgctgggtacatcact
gaggcgggcctgagccgggtgtacattggcatcaatgacatagaccgtgagggccatttc
acctacgtggatcgctcccccatgagcaccttcagcaagtggagggaaggagaacccaac
aatgcctacagggacgaggactgtgctgagatgatggcggcgggggactggacagatgtg
gcctgccatcccaccatgtactttgtgtgtgagtttgacaaggacattgtctga
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