Oncorhynchus tshawytscha (Chinook salmon): 112262431
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Entry
112262431 CDS
T05605
Name
(RefSeq) intersectin-2
KO
K20045
intersectin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262431
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112262431
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
112262431
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112262431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_13
SH3_2
SH3_9
SH3_1
RhoGEF
EF-hand_4
C2
EF-hand_1
EF-hand_7
EF-hand_6
PH
Motif
Other DBs
NCBI-GeneID:
112262431
NCBI-ProteinID:
XP_042185757
LinkDB
All DBs
Position
LG11:complement(16088535..16124144)
Genome browser
AA seq
1734 aa
AA seq
DB search
MNGGRNVWAISPEERDKHDKQFDTLSPATGFVSGEQARKFFLQSGLPSSVLAEIWALADM
NKDGKMDRLEFSIAMKLIKLKLQGTPLPSSLPIIMKQPPVPAPSSTGAMSSSRYGMGSMP
NLSMMPGAIAMLTPIPMTSNFASMTPNLSSMTPNLSSMTPNLSSMTPNLSSMTPNLSPMA
PVTGLTPMVPMATGMVPLVATSTMPLLPSLGSPALPNGTMGILQQLPPGHMGTGLPLSVS
YTSPLGFSPGMNKATSLLDLGSSSSNSSSTTSLAGSSPKTAPSDWAVPQASRLKYRQQFN
SLDKHMTGYLTGQQVRNAMATTLLTQTQLATIWTLADVDKDGKLRGEEFILAMHLVDMAK
TSQPLPLTLPIELIPPSQRYTHTQTNPYLTLLLSLSGRGAVNGTSLSLYAGITEELEAEP
PQKPKSNLSFEDKFKANLERGNAELEKRRQALQDTQRREEERRQQKEREERERREREARE
QEERRRKEEERRLERQRELERQKEEERLKEIERKEVAQRELERQRKEEWERRRRGELLSQ
KSQEQEDIGRLKTRKRNLEMELEAVGNKHRQISERLHDAQSKRKVQRSELELTNQRRDTS
RLDINSLQRQLEEYQRKLSQLTPEQQRLSDKLRNMALNNLPVSTMSTLKRSASEKDGVCR
KLKQQLDALENETAAKLADMDQYQNDIQDLRESQRKQQSALDKLRSIKEDKRRELERQRA
QEEERKRREEEEAQRRIKLEKERQWQKKLQREEEERQMRLQEEREAKLREEEEKEERKRV
EEERRRQEEVDRKRREEDRKRSAALTSFRALYPFTARNQDELSFEADELIEVDESTEREQ
GWLYGCRQGKMGWFPESYVERQAKPETPAVINATPAATTTAVATTAVYATVAKQAPRPQL
STPKHTGKPGGDATMPTGQNSAFTPTHAPHHTPLDQIQVAGSLQAQALCSWTAKTESHLN
FSKDDVIWVLEQQDSWWLGELNGAQGWFPKTYVTLLGENEDTTNSINSPPDGSEATDAAQ
QEEYVALYTYESPEPGDLTFREGDVILVTQREGEWWSGGIGDRTGVFPSNYVKPKETDTS
SNSGKSGQPGKKPEIAQVSTTYTATGTEQLSLAPGQLILILSKNPTGWWLGELQARGKKR
QKGWFPASHVKMLGSNSGKSTPAPLPVCQVIAMYDYKAANEDEMSFSKGQLISVFDKNDP
DWWKGEVNGVTGLFPTNYVKMTTADTDPSQQWCADLNSLDSMSPQERKRQGYIHELLQTE
ERYVEDLQIVMEVFHKPMSESGRLTEAEMAMIFVNWKELIACNTKLLKALRVRKKTGGEN
MPVQVIGDILSSELAHLQPYIRFCSCQLNGAALLQSRTDNQQDFKDFLKKIATDYRCKGM
PLSSFLLKPMQRITRYPLHIKNILESTQEDHADRRPLREALERAEELCSQVNEGVREKEN
SDRLEWIQSHVQCEGVTENLVFNSLTNCLGPRKLLHSGKVYKIKSNKELWAFLFNDFLLL
THAAKQFSSSGPDKLFSTKNNTQLKMYKPPVFLNEVLVKLPDPSSEEPFFHISHIDRVYS
LKTENINERTAWVQKIKAASEDFLETDKKKREKAYQARSLKASGIGRLLVTILEATELKS
CKSNGKSNPYCEVTMGAQIYTSRTLGDTVNPKWNFNCQFNIRDLYQDVLCITIFERDQFS
PDDFLGRTEVPVATIKKELENKGPATRRLLLHEVPTGEVWVRLDLQLFQNRASK
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggccgcaatgtgtgggctatctctccagaggagagggacaaacatgataaa
cagtttgacaccctctctcccgcgacgggcttcgtctcaggggagcaggccaggaagttc
ttcctgcagtcgggtcttccctcctcagtactggcagagatatgggccctggctgacatg
aataaggatgggaagatggacaggttggagttctccatcgctatgaagctcattaagctc
aaacttcagggcacaccccttccctcatctctaccaatcatcatgaagcagccgccagtg
cccgccccttcctcaacaggcgccatgtcctcctcacgctatggaatgggctccatgcca
aacctgtcgatgatgcctggagccatcgccatgctcacccccatccccatgacatccaac
ttcgcatccatgacccctaacctctcatccatgacccctaacctctcatccatgacccct
aacctctcatccatgacccctaacctctcatccatgacccctaacctctcacccatggcc
cctgtgactggcctcactcctatggtcccaatggcaacaggcatggtccccctggttgcc
acgtcaacaatgcccctgctgccgtccctgggcagccccgctctccccaatggcactatg
ggtatcctacagcaacttccaccaggacacatggggacaggcctgcctctctctgtgtcc
tacacctctcctctgggtttctctcctgggatgaacaaagctacgtcactgctggaccta
ggctcaagcagctccaactcttcatccaccacctccctggcaggaagttctcctaagacg
gcgccctctgactgggccgtgcctcaggcctcgcgcctgaaatacagacagcagttcaac
agcctcgacaaacacatgacgggatacctcacaggtcagcaggtgaggaatgccatggca
accactctgctcactcagacacagctggccaccatctggaccctggccgatgtggataag
gatgggaagctaagaggagaggagtttattttggccatgcatctagtggacatggccaag
acctcccaacccttacctctcacactacccatagaactaataccaccatcacagaggtac
acacacacacaaacaaacccctacctaacccttctcctctctctttctggaaggggtgcc
gtgaatgggaccagtttatctctctatgctggcatcactgaagaactggaggctgagcca
ccacagaaacccaaaagcaacttatcgtttgaggataaattcaaggccaacctggagcga
gggaacgcggagctggagaaaagacgacaggctctgcaggacacacagaggagagaggag
gagagacgccagcagaaggagagagaggagcgagagaggagagagcgggaggccagagag
caggaggagaggagaaggaaggaggaggagaggaggctagagcgacagagggagctggag
agacagaaagaggaggagaggctgaaggagattgagagaaaagaggtggcgcagcgtgag
ttggagcgccagaggaaagaggagtgggagaggaggaggagaggagagctgctgagccag
aagagtcaggagcaggaagacatcggcagactaaaaaccaggaagaggaacctggagatg
gagctggaggctgtgggtaacaaacacaggcagatctctgagcggctgcatgatgctcag
agcaagaggaaggtgcagcggagcgagctggagctgaccaaccagagacgagacacaagc
agactggacataaactccctgcagagacaactagaggagtaccagaggaagctgtcccag
ctgactccagaacagcagaggctcagtgacaaactgaggaacatggccctcaacaacctg
cctgtctccaccatgtccacactgaagcgcagcgccagtgagaaggacggagtgtgtcgc
aaactgaagcagcagctggatgctctggagaacgagactgctgctaaactggccgacatg
gaccagtaccagaacgacatacaggatctgagagagagccagcggaagcagcagtcggct
ctggataaactacggagcatcaaagaggacaaacggagagaactggagagacagagggcg
caggaggaggagaggaagaggagggaggaggaggaggcccaaaggcgcattaagctggag
aaggagcgtcagtggcagaagaagctgcagagagaagaggaggagagacagatgaggttg
caggaagagagggaggccaaactgagagaggaggaggagaaggaggagaggaagagagtg
gaggaggagaggagaaggcaggaagaggtggacaggaagaggcgcgaggaggacaggaag
agatctgcggcgctcacttccttccgggcgctctacccttttacagctcgcaaccaggac
gaactcagcttcgaggccgatgagctcatcgaggtggatgagagtacggagcgggagcag
ggttggctgtatggctgtcggcaggggaagatgggctggttcccagagagctacgtggag
agacaggccaaaccagagacacctgctgttattaatgcaactccagctgccactaccact
gctgttgctactactgctgtttatgctactgttgctaaacaggcccccagaccacaactc
tccactcccaaacacacagggaaacccgggggagacgctaccatgccaacgggacagaac
tccgccttcactcctacacacgcccctcaccacacccccttggatcagatacaggtggcg
ggtagcctgcaggcccaggctctgtgttcgtggacagctaagacagagagccatctgaac
ttcagtaaggacgatgtgatctgggtgctggagcagcaggacagctggtggctgggggag
ctcaatggggcgcaaggctggttccccaaaacatatgtcacactcctgggagagaatgaa
gacaccaccaactcgataaattcccctccggatggctctgaagccacagatgctgctcaa
caggaagagtacgtggcgctgtacacctatgagagcccagagcctggcgacctgacattt
agggagggtgatgtcatcctggtgacccagagagagggagagtggtggagtggaggcatc
ggagaccgcaccggggtgttcccttctaactacgtcaaacccaaagagacagacacatcc
agcaactccggaaagtcaggtcagcctgggaagaaaccagagatagcccaggtgagcaca
acatacacggccacggggacagagcagctcagcctggcgccaggacagcttatcctcatc
ctcagcaagaaccccaccggctggtggctcggagaactgcaggcgcggggaaagaagcgt
cagaagggttggtttcctgcctcgcacgtcaaaatgctgggatccaacagcggcaagtcc
acgccagcacctctaccagtgtgtcaggtcattgccatgtacgactacaaggcagccaac
gaggacgaaatgagcttctccaagggtcaactgatcagtgtgttcgacaagaacgacccc
gattggtggaaaggggaggtcaacggggtcaccggtctgttcccaaccaattacgtcaag
atgaccactgccgacaccgaccccagccagcaatggtgtgctgacctgaacagtctagac
tctatgagtccccaggagaggaagagacagggctacatccacgagctcctccagacagag
gagagatatgtggaggacctccagatagtcatggaggtgttccataagcccatgtctgag
tcgggccgtctgacagaggcagagatggccatgatctttgtcaactggaaggagctcatc
gcctgcaacaccaaactgctaaaggctctgcgtgtgcgtaagaagacggggggtgagaac
atgcctgtccaggtgatcggggacatcttgtcgtccgagctggctcacctccagccttac
atccggttctgctcctgtcaactcaacggagctgctctgctacagagtaggactgacaac
caacaggactttaaagacttcctcaagaaaatcgccacagactaccgctgtaaaggcatg
cccttatccagcttcctgctgaagcccatgcagaggatcacacgctaccctctacacatc
aaaaacatcctggagagtacccaggaggaccatgcagaccgcaggcctttgagagaggct
ctggagcgggctgaggagctctgttctcaggtcaacgagggagtcagggagaaggagaat
tctgacaggctggagtggatacagtcacatgtacagtgtgagggagtcacagagaacttg
gtgtttaactctctgactaactgcctggggccccgtaagctgctccacagtgggaaggtg
tataagattaagagcaataaggagctgtgggctttcctctttaacgacttcctgctgctc
acccacgctgccaaacagttcagctcctcaggaccggacaagctcttcagcaccaagaac
aacacacagctcaagatgtataaaccgccggtgttcctcaacgaggttctggtgaagttg
cctgacccctccagtgaagagcccttcttccacatctcccacatcgaccgagtctacagc
ctcaaaaccgagaacatcaacgagaggacagcctgggtgcagaagattaaagctgcctca
gaggacttcttagagaccgataagaaaaagagagagaaggcataccaagctcgttccctg
aaggccagtggaatcggccggctgttagtcaccatcctggaggccactgaactcaagtcc
tgcaaatccaacggtaagagtaacccttattgcgaggtaaccatgggggctcagatctac
acctctaggaccctcggtgacacggtcaaccccaagtggaacttcaactgtcagttcaac
atcagagatttgtaccaggacgtcctttgcatcaccatcttcgagagggaccagttctcc
cctgacgacttcctgggtcgcacggaggttcccgtggcgaccataaagaaggagttggag
aacaagggtccagcgacgcgccgtctgctcctccacgaggtccccactggagaggtgtgg
gtccgcctcgacctgcagctctttcaaaacagagcatccaaataa
DBGET
integrated database retrieval system
