Oncorhynchus tshawytscha (Chinook salmon): 112262494
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Entry
112262494 CDS
T05605
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112262494
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112262494
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
112262494
NCBI-ProteinID:
XP_042187144
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All DBs
Position
LG12:3613728..3651286
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AA seq
1123 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPGAVAYTHPTTVASYTVH
QAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAAAYGGYQPAHATADYGYAQRQPDV
PPPPPPVTSQNYQVGYQDSYSYVRSTAPAVTYDPKQYYQQPVASAAVAVQPQPTAESYYQ
TASLNTSWDTPWKKSLPASKTGYTQTSLAPYTQTQQTRQVTAIKPAVPSTFSIYPVSSTV
QPVAAASVVPSYSQSPTYSTNAVTYSGKHDMQAVTSMHYLPTTYSTNAVTYSQSPTYSTN
PVAYSGTSYSGYEAAVYSAASTYYQQQQQKQAVAAVAASAAWTGSSFTKKPPFQSKQLKP
KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEVALKVSQSSSSSSSGGGSARGT
QNQLRCELCDISCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTQTPTSTTAS
SSKTPASSSSTLTGSTSNSSYLKPVNIVSQGGVGIGKGPATNSLSAANATTAVKKVNTPK
INFVGGNKLQTTGKVTEEAKVEASKPPLPSLVPQVQESKNESSDSLSASTLAALQSDVQP
VGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVK
PSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRCMEEQHHWDERRGG
PRMPGDGPYLQGPPGPPGLLGVRPGMPISQPQGPVPPRRPDSSDDRYVMTKHTAIYPSEE
ELQAVQKIVSITERALKLVSDITDQEKTKETTGEEKEKEVPKTAQDRALKGVMRVGVLAK
GLLLRGDKNVNLVLLCSEKPTKTLLSCIVEHLPKQLVLVTPEKYEVKGSIEDCSIILTSE
ADPKMTVTVTLTSPSIREEETPATPLPRDGDVTLVKDPEDVLDRLKCLAALAALRHAKWF
QARANGLQSCVIVIRILRDLCQRVPTWSSFPSWAMELLVEKTISSASGPLSPGDALRRVF
ECISSGVLLPGGPGLVDPCEKNPTDTLTTMEEQHREDITSSAQFALRLLAFRQIHKVLGM
DPLPQMNPRFNVHNNRKRRRDIDGADGFEGEGKKDKKDFDSSY
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtggtctccttcacctatgtgcccagccggctaggtgaagat
gctaaaatggctaccggcaactactttggatttacccacggtgctgccgcgcagtacagt
cagcagccgggcgcggtggcctacacccaccctaccaccgtggccagctacacagtacac
caggcaccggtggctgcccacaccgtggcagcagcctacgctcccaccgctgccacggtt
gctgtagccaggcccgccccagttgccgtggcagccgcagccaccgccgcagcctacggc
gggtaccagccggcgcacgccaccgcagactacggctacgcacaacgccagccggacgtc
ccacccccgcctcccccggtcacctcccagaactaccaggtgggttaccaggactcctac
tcctacgtacggtctacggccccggcggtaacctacgaccctaagcagtactaccagcag
cccgtagctagcgctgcggtagccgtacagccccaacccacggccgagtcctactaccag
accgcctcccttaacacctcctgggacaccccgtggaagaaatccctaccagcttctaaa
acaggctacacccagacaagtctggccccctacacccagacccagcagaccaggcaggtg
acggccatcaagcctgctgtgccctccaccttctcaatctacccggtctcctccaccgtt
cagcccgtagccgccgcctctgtggtcccctcctactcccagagccctacctactccacc
aacgcggtcacgtactctggtaagcacgacatgcaagccgtaaccagcatgcactacctg
ccaactacctactccaccaacgcagtcacgtactcccagagccccacgtatagtaccaac
cccgtcgcctactctggcacctcgtattcgggctacgaagctgcggtgtactctgctgcc
tcaacctactaccagcagcagcagcagaaacaggctgtggcggctgtcgcagcttcagca
gcctggacaggcagctccttcaccaagaaacctcccttccagagcaagcagctgaaaccc
aagcagccccccaaaccaccacagatccactactgtgacgtctgcaagatcagctgtgca
ggaccccagacctacaaggagcacctggagggccagaagcacaagaagaaggaggtggcc
ctgaaagtctcccagagcagcagcagcagtagtagtggaggaggctcagcccgggggact
cagaaccagctccgctgtgagctctgtgacatctcctgcaccggagcagatgcatacgct
gcacacatccgaggagccaagcaccagaaggtggtgaagctccacaccaagctggggaag
cccatcccctctacagaacccaatgtcgtgacccagacccctacgtcaaccacggcctcc
tcctccaagacccctgcttcctcttcttccaccctcacaggctctacgtctaactcttcc
tacctgaaaccggtcaacattgtcagccagggtggggttgggattggtaagggtccagcc
acaaacagcctatcagcagccaatgccaccacagccgtcaagaaggtcaacacccccaag
atcaactttgttggaggaaacaagctccagactaccgggaaagtgacagaggaagccaaa
gtggaggcatccaaacctcctctgccctcattggttccccaggttcaggagtccaagaac
gagtcctctgattccctgtctgcgtccaccctggctgccctgcagagtgatgtgcagcct
gttggacatgactatgtggaagaggtgcgtaacgacgaaggcaaggtgatccggttccac
tgtaagctgtgtgaatgtagcttcaacgatcccaacgccaaagagatgcatctgaagggc
aggagacaccgcctgcagtacaagaaaaaggtgaacccggagctgcaggtggaggtgaag
ccctctatcagagccaggaagatccaggaagagaagatgaggaaacagatgcagaaggag
gagtactggaggaggagagaggaagaggagagatggaggatggagatgagacgttatgag
gaggacatgtactggcgttgtatggaggagcagcaccactgggacgagagacgtgggggg
cccaggatgccaggggacggaccatacctccaggggcctcctggcccacctggactactg
ggggttcggcctggcatgcccatctctcagccacaaggacctgtgcctccccgtcgcccg
gactcgtcagacgatcgctacgtgatgacgaagcacacggccatctacccttctgaggag
gagctgcaggccgtccagaagatcgtctccatcacagagagagccctcaaactggtctcg
gacatcacagatcaggagaagactaaggagacgactggggaggagaaagagaaggaggtc
ccaaagactgcccaagaccgagctctgaagggggtgatgcgggtaggggtgttggctaaa
ggactgctgctccgcggagacaagaacgtcaacctggtcctgctctgttcagagaagccc
accaagaccctgctgagctgcatagtggaacacctgcccaaacagctggtgctggtgacc
ccagagaagtacgaggtgaagggttccatcgaggactgttctatcatcctgacgtcagaa
gccgaccccaaaatgacagtcaccgtcaccctgacctccccaagcatccgagaggaggag
acccctgccacacccctgccacgggatggagatgtaaccttggtgaaagacccagaggac
gtcttggacaggctaaaatgccttgccgctctggcggctctgcggcacgctaagtggttc
caggctagggccaacggactccagtcctgcgtgattgtaattcgaatcctgcgtgacctc
tgtcagagggtccccacgtggtcctccttccccagctgggccatggagctgttggtagag
aagaccattagcagtgcctctggccccctgagcccaggcgatgcactgagacgagtcttt
gaatgcatttcctccggagtcctgctccccggtggtccgggattggtcgacccgtgtgag
aagaaccccactgacaccctgacaaccatggaggagcagcacagagaggacatcacctca
agtgcccagtttgctctgcggctgctagccttccgtcagatccacaaggtgctgggcatg
gacccactgccccagatgaaccctcgtttcaacgtccacaacaaccgcaagcgtcggcgc
gacatcgacggagcggacggcttcgagggcgaagggaagaaggacaagaaagatttcgac
agtagttactag
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integrated database retrieval system
