Oncorhynchus tshawytscha (Chinook salmon): 112262505
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Entry
112262505 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112262505
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112262505
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112262505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Zn_SUZ12
zf-C2H2
Di19_C
zf-C2HC_2
SWIRM-assoc_1
ATG14
Motif
Other DBs
NCBI-GeneID:
112262505
NCBI-ProteinID:
XP_024293892
LinkDB
All DBs
Position
LG12:6331076..6343683
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AA seq
422 aa
AA seq
DB search
MSRHEGQGSGQNGPSVNCLSPGVSCDACLKGNFRGRRYKCLICYDYDLCASCYEGGATTT
RHTAEHAMQCILTRVDFDLYYGGEALSVEQPQAFTCPYCGRMGYTETSLQEHVAADHTET
SSEVICPICASLPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGP
RARRSNMHFTSSTSGGSSTTQTSTQSSNYNREAMDPIAELLSQLSGVRRSAGGQLSSGPS
ASQLQQLQMQLQLERQQTQAARQQLETARSATQRSSRTSTNAGLNANPSPGHHNANPSSN
STSPNPGHHEFTTHTQHSNSQFLLNRLSEPRLSEAERQLSEGQWADRSLFVTELLLSTLL
ADPDHSEDDDLHDYHDAVIRGSDAFSDFGTFGDMGCVEVMTLDVALENLNLREQKEQRPP
PL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgaaggacagggtagtggtcaaaatggtccgtctgtgaattgtctttcc
ccaggtgtgagctgcgatgcgtgtttgaagggtaacttccgggggcggcgatacaagtgt
ttaatttgctacgactacgacctgtgtgcgtcgtgctacgagggcggagccacgaccacc
agacacacggcagagcacgccatgcagtgtatactaaccagggtcgacttcgacctatat
tatggaggagaggccttgtcagtggagcagccacaggcctttacctgtccctactgtggc
aggatgggctacacggagacctcccttcaggagcacgttgctgcagatcacacagagacc
tcctcagaggtgatctgtcccatatgtgcttcgctgcccggcggggaccctaatcacgtg
actgacgacttcgctgctcatctcacacttgaacacagagcccccagagacttggatgag
tcgagcggggtgcggcacgtgcgtaggatgttccacccgggccggggtctaggagggccg
agggcccgtcgatccaacatgcacttcacctcctcaacctccggggggagctctaccaca
cagacctctacacagagctccaactacaacagggaggccatggatcctatagctgagctt
ctctcccagttgtcgggggtgcgtaggtcggcgggcggccagctgagttcaggtccttca
gcatcccagctacagcagctccagatgcagctccagttggagcggcaacaaacccaggct
gccagacagcagttggagactgcccggagtgccacgcaacgcagcagccgtacctccacc
aacgcagggctgaatgccaatccaagcccagggcatcacaacgccaaccccagttccaac
tctaccagccccaacccagggcatcacgagttcaccacacacacacagcacagcaactcc
cagttcctcctcaacagactgagtgagccgaggttgtcggaggcggagcgtcagctgagt
gagggccagtgggcggaccgctctctcttcgtcacggagctcctcctctccaccctgctg
gccgatcccgaccacagcgaagatgacgatctccatgactaccacgacgccgtgatccga
ggttctgacgcgttcagtgatttcggcaccttcggagacatgggctgcgtggaggtcatg
accttggacgtggcgttggagaacctcaacctccgagaacaaaaggagcagcgacccccg
cctctttga
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