Oncorhynchus tshawytscha (Chinook salmon): 112262507
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Entry
112262507 CDS
T05605
Name
(RefSeq) PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112262507
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112262507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Fibrinogen_BP
Motif
Other DBs
NCBI-GeneID:
112262507
NCBI-ProteinID:
XP_042187080
LinkDB
All DBs
Position
LG12:3851035..4093250
Genome browser
AA seq
2948 aa
AA seq
DB search
MPITQENALSHIHLLEDWLLVAQTRYEDHYGDPDQQSTTSRDPDQDSYQESEHEEDACST
VSGSTVSGSTVSGSTVSGSTVSGSTVSGSMVNSGSCRGTRGDMSLCQAAIQKLMEYIQLN
FTEEGEIQSPALRPTTPCGGVDAEVRAVCLTKREGDGAELGLSFGNIPIFGDPEGEDRKK
GGGRRRRRRKGDQGPVLDVGCIWVTEVRKRSPAARCGRIKLRDELLSLNGQLMVGVDVTG
ASYLADQCWNGGCIYLIMLRRIKRKAPLPPCNGNGNATITGGSGGIQDGQNSLHHRSSVS
SEPPDSLPTQTGGSKRTRKFGIIARSTFNRDSKDLGPKNESWDDGGGETLENGYRGHRDS
AISMDTRVTPPEPSSCTTSMDTPPEEEPREPRTVLPPLAIPHHLQNGGGTATLPNRFHRG
LSEHKTESLSSDASCQPREGSRIWTMHMVKGQEGLGIQITGGRGSKRSPHGIIIAHIEEG
GATQRDGRLKAGDELLMINGQSLVGLSHSEAVDILRSTAGLVQLVVASREESEVDFQRYP
STSLPDLVSTCASSSSSSASPSDNQENMEPHHRHGVWEDLAAGSLSLSRSRPTTLTDLEK
LEDRGRVEGQKETCRSPTSMKFRSRSQGGGSRLESVGEDDELIVENGEAGSDMVEKPTRG
GRKHSLPQQLDTVGIRQEYQIVKKSARSLSTFQVESPWRLAQPSIISNIVLMKGQGKGLG
FSIVGGQDSARGRMGIFVKTIFPNGAAVADGRLKEGDEILEVNGDSLQGLTHQQAIQTFK
QLKKGVVTLTVRTRLRSPSLTPCPTPTLLSRSSSPNSNASGGNPTPVPTTFDEPPETRKG
PPGPGPKDRIIMEVTLNKEPGVGLGIGTCCLTLENSPPAIYIHSLAPGSVAKMDGRLSRG
DQVLEVDSVSLRHVALSEAYAILSECGPGPVSLIISRHPNPKVSEQEMDDVITRSSHRDS
LSKDGHASQTLGMPSKSPSLTVKAKQADGSSLSWTMKRFLEPASRQGSLSSEAELSQYFS
QEVTSHSSLSETTAMGSSDDDMLHHRSCNTSIDDTPATQPHGLKDASGVGVEVSVEVRTD
DKAPGVPVLNRPVEATQRQPSVCSPGSSSVRSPLLRQRRVICHDDEVSDDEDAVTLPFRQ
VAGRVTAMGVVADSSIMISASSVELDEESEGPHILLHSNSLESQEGVGFVTSSGAESPFM
PIRRSDHHQTPGGGGGSFPTTGPSNLGVRMDPQGPLEPKHSPKLEHKAVTRVKTMLSIEA
PPIQPTNQQNQNQRTKGEESPTSPSSQSLAPQPGVASSRSLGRPGCNPNLLCKKGEACSE
LAGEEPAHCTIDKVVLRRSEEESFGLDLEIRSSPLKVVITGLRLGGAAERESRGRMCVGD
EIVSIGDTPTCSSSYHDICELMHNLPVTLALEVKRPMSAVDRLSSLMMSSGSCDVMGPSN
GRAPNPGSPSSSSPTNHNPKPTTPINHNHSNDIPVTYIDDVMTRLSSSHVKSALSSNTLK
APSEAQRTETMACKSAVDSKALPENEKSTVQTPPTLPSQFDFSVLDSGKKCCLMPVGKTF
LNNYSRNFSSNLTDEGMNALSNRVERPPGASAADSNCNMYDMVGDSDSESEDTVTDNSRG
AAGDNKPASRSVGAEPQDTDSDEEEVEICYSEAQRPSTLSQAALTHLTDGPLSPQLHISI
SGSDGSHSTKETRPFDVALDSAASSSSTVTTTSAASQQNEDCSVVTTQSNPDQKPFPSLS
QGLPASGSLSSGAFLAVEAKGSPCQEMPRQSSNDTDSVPTTSPVGPSESGVNRVCDTVIT
HPIKPGHAPSLSVCSTPIAAASHNIARQSQERSARLRANVSPAAALGKLSNTQSSSSHST
VGEANPSNYSNVWSGASKPLSTSLTTRESQREKVPSSISLTTRDREREKVPSSISLTTRD
SEREKVPSSTSLTTRDSEREKVPSSISLTTRDREREKVPSSTLPTTRDRESEKVPSSTSL
TTRDSEREKVPSSTSLTTRDREREKVPSSTSLTTRDREREKVPSSTSLTTRDREREKVPS
STSLTTRDREREKVPSSTSLTTRDREREKVPLTSLDLRLVQNNPNSPSLRTSGPKSVNNI
STDSPLSSSSSRLRVNDKVQKTSCTAPKMKGLNIKSKTKPQEQLSPKPARAESPLVLRKA
NNTSPLQSPKLQAKKVGSPLQTRNVDSPLLTRKAAVTSSLKSKQQDRSSSSSSPATPVTD
GGQDNPTTTTTPETISQSQSITKMKVEEQRLHKEVEQGILAVAKSKERPEPVLTTQRTFI
EVRLSSSSPSSTPTPVLAPKEAVYSNDYSIPHTKNITQHKDQVNGNPVETSLWSGTPATP
GSVCNLEKVNNTTSESAVNSIVLESVDGVPLPMSNGPTDISHMNCRITETDETESLKANK
SKLKAMERRSFSTDNSVSGDPNPFSVRQRIKSFENLASFDKPVLKCIDIQSFAQSYALTA
TLKPPLNRRLSGYMSGSVSSIDCRSLRRSFSSCIDNFNALTPLTPMSPQLRKSPSSLTLT
NFDLLTQSCSTSEAPLGHIQDKLGDGESPRISPGVVTLTPQTPPVMRSRQARGHANLSRS
RLRELRALSMPDLDKLCTDDFSSDPGTNATINTSLEIHPARPTEVVQNQTGCCSPPANPT
GVHPTRASRADAGASLDPIQRKTNCQQADIQNWSISLTVVASSPVEQSKLQAVLASVTTK
TDVLALLQEAKALSEDKDDTHFVVFSKEEGSGLGFSIAGGMDLEQKSITVHRVFSKGVAG
LEGTIQRGDSILSINGSSLEGMSHVEAVSCLHHARLSSQVLVVIRRGKDSEGQMSPRQHD
LSHHTGRSYSLGCRENRPETTRSVMGLGVVEVGPDGALRVELLKTSAGLGFSLEGGKASS
QGDLPLNVKRVFKGGAAELSRVVDVGDEVLEVNGRSLQGLMHYDAWNIIKAVSEGPVQLV
IRKPRTSV
NT seq
8847 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacccaggagaacgccctgagccacatccatctactggaggactggctcctg
gtggctcagaccaggtacgaggaccactatggagacccagaccagcagtccaccaccagc
agagacccagaccaggactcgtaccaggagtcagaacatgaggaggatgcctgcagcacg
gtcagtggcagcacggtcagtggcagcacggtcagcggcagcacggtcagcggcagcacg
gtcagtggcagcacggtcagtggcagcatggtcaacagcggcagctgcagaggtaccaga
ggagacatgtctctatgccaggccgctatacagaagctgatggaatacattcagctcaac
ttcacagaggaaggagagatccagagtcccgccctccgacccacgacgccgtgtggaggt
gtggatgcggaggtgcgagccgtgtgcctcaccaagcgagagggggacggggcagagctg
ggactcagtttcggtaacatccctatattcggggatccggagggggaggacaggaagaag
ggaggagggagaaggaggaggaggaggaagggggatcagggacccgtgttggacgtgggg
tgtatctgggtaacggaggtgaggaagagaagtcccgcggcgaggtgcggtagaattaaa
ctacgagacgagctgctgtcactcaacggtcagctgatggtgggcgtcgacgtcacggga
gccagttatctggctgaccagtgctggaatggcggctgcatctacttgatcatgctccgg
aggatcaagcgtaaagcccctctccctccgtgcaatggaaacggcaacgccaccatcact
ggtggcagcggtggcatccaagatggccaaaactccctgcaccataggagcagcgtgtcc
tccgagcctcctgacagccttccgacgcagaccggtggcagcaaacggacgcgaaagttt
ggcatcatcgcccggtcgacgttcaatcgtgatagtaaagacctgggccctaagaacgag
agctgggacgatggcggtggggaaacgctggagaacggttaccgtggccacagagactct
gcgatctccatggacacgagggtcacgcccccagagcctagtagctgcacaacttccatg
gacacgcccccagaggaggagccaagagaaccgaggactgttctgccccctctagcgatc
ccacatcatctgcagaacgggggaggaaccgccaccctgccgaatcgcttccacagagga
ctgtcagaacacaagacagaatctctcagcagtgatgcctcctgtcagcccagagagggg
agtcgtatctggacgatgcacatggtgaaaggtcaggaggggctgggcatccagattacg
ggaggacgagggtccaagcgctccccgcacggcatcatcatagcgcacatagaggaggga
ggcgccacacagagggacggacgtctgaaggctggtgatgagctcctgatgatcaacggt
cagtctctggtcggcctgtctcattcagaggctgtagacatcctacgctctaccgctgga
ctggtacaactggtcgtcgctagcagggaggagtctgaagttgatttccagcggtatccg
tccaccagcctgccggacctggtcagtacctgcgcctcgtcttcttcctcctctgcttct
cccagcgacaatcaggagaacatggaacctcatcacaggcacggagtttgggaggacctc
gcagccggcagcctcagcctctctcggtctcgacctaccacactgactgatctggagaag
ctagaggaccgaggccgggtggaaggacagaaagaaacctgccgctctcccacatccatg
aagttcaggagcagatcacaagggggcggtagtcgtctggagtctgttggagaggatgac
gagctgattgtggagaatggagaggcggggagtgacatggtggagaaaccgacacgaggt
ggacgcaaacactccctgcctcagcagttagacactgtaggcatccgacaggagtaccag
atagttaagaaatcagctcgctccctgagcacctttcaagtggagtctccatggcgactg
gcccagccgtctattatatccaacatagtcctcatgaaaggacagggaaagggactgggg
ttcagcatcgtcggaggtcaggactctgcccgaggaaggatggggatctttgtcaagact
atcttccctaacggagcagcggtggcagacggacgactgaaagagggagatgagattctg
gaggtgaatggagactctctccaaggcctgacccaccagcaggccatccagaccttcaag
cagctgaaaaagggtgtggtgactctaacagtacggacacgtctccgaagccccagcctg
acgccgtgccccacccccacccttctcagccgctcctcctccccgaactccaacgccagc
ggaggcaaccccaccccagtacccaccaccttcgacgaaccccccgaaacccgcaaggga
cccccgggtcctggccccaaagaccgcatcatcatggaggttacactcaacaaagagcca
ggggtgggtctgggtatagggacctgctgtctaactctagagaacagtcctccagccatc
tacatccacagtctggcccccggctctgtcgccaagatggatggacgactcagtcgaggg
gaccaggtcttggaggtggactctgtgagtctacgccatgtggccctgagtgaggcctat
gctattctcagtgagtgtggaccaggaccagtcagcctcatcatcagcagacaccccaac
cccaaggtttcagagcaggagatggatgatgtaatcactaggtcttcacacagagacagt
ctgagtaaggacggacacgcctctcaaactctaggcatgccttctaagagcccctccctc
acagtgaaggccaaacaggcagatggctcttccctcagctggactatgaagaggttcctg
gagcccgccagcaggcaagggtctctgagttcggaggcggagctatctcagtacttttcc
caggaagtaaccagtcattcgtcgctgtcggaaaccactgcgatgggatccagtgatgac
gacatgctccaccacaggagctgtaacacctcaatagacgacacccccgccactcagcca
catgggttaaaagatgcctctggtgtaggagtggaggtcagcgtggaggtcagaacagat
gataaggctcccggtgtcccggtgttgaaccggccagtggaggccacccagcgccagccc
agtgtgtgtagtcctggtagcagctccgtccgcagtccactgctccgacagagacgagtc
atctgccatgacgatgaggtcagcgatgatgaagatgctgttaccctgcccttccgccag
gtcgctggtcgtgttaccgccatgggggtggttgctgactctagcatcatgatctctgcg
tcatcagtggagttggacgaagagagtgaaggcccacatatcctgcttcatagtaattct
ctggagtcacaggaaggggtcggtttcgttacttcctccggcgcagaatcacccttcatg
cctatccgccggtcggaccaccaccagacccccgggggaggaggagggtctttccccaca
acaggccccagtaacctgggtgtgaggatggaccctcagggccccctggagcccaagcac
tcccctaagctggaacacaaagctgtgacacgcgtcaagactatgctgagcatcgaggcc
ccgcccatccagccaaccaatcagcagaaccagaaccagagaaccaaaggagaggagtct
ccgacctccccatcctcccagtctctagcccctcagcctggggtagcctccagccgctcc
ctgggacggcctggttgtaaccccaacctcctctgtaagaagggcgaggcctgcagcgag
ctggcgggggaggagccagctcactgcaccatcgacaaggtggtcctgaggaggagtgag
gaagagtccttcggtctggacctggagatcagatcctctcctctgaaggtggtgatcact
ggattgaggcttggaggagcggccgagagagaatcccggggcaggatgtgtgtgggagac
gagatcgtgtcgattggggacacgcccacgtgctcctcgtcctatcacgacatctgtgag
ctcatgcacaaccttcccgtgaccctcgcgctggaggtcaagaggcccatgtcagctgta
gatcgcctgtccagcctcatgatgtcatcggggagttgtgatgtcatgggtccctccaat
gggagggctccaaatccaggaagtccctcctcctcctcaccgaccaatcacaatcccaaa
cccacaaccccaatcaaccacaaccacagcaatgatataccggtcacctacattgatgat
gtcatgaccagactaagctcctcccatgtaaagagcgccctctcttccaataccctcaaa
gccccttcagaagcacaacgtactgagactatggcctgtaagtcagctgtagacagcaag
gccctgccagagaatgagaaaagcacagttcagactcctccaacattgcccagtcagttt
gatttctctgtcttggactctggaaagaaatgctgcctcatgcctgtgggtaaaacattc
ttgaacaattactccagaaactttagcagtaatctcacagacgagggaatgaatgctctt
tcaaatagggtggagagaccccccggtgcctctgctgccgattcgaactgcaacatgtac
gacatggtcggcgacagtgattcggaaagcgaagacacggtcaccgacaacagccgtggc
gctgccggcgataacaaaccggcgagccgcagtgtcggcgctgagccccaggacacagat
tctgatgaggaggaagtggagatttgttacagtgaggcccagcggcccagcactctgagt
caggcagcgctgactcacctaacagatgggccattgtctccacagctccatatctctatc
tctggctctgacggcagccacagtacaaaggagactaggccctttgatgtagcactagac
tctgctgcttcctcctcctccactgtcactactacttcagcggcctcccagcaaaacgaa
gactgctctgttgtaacaacccaatccaaccccgatcagaaaccattcccctcactgtct
cagggtctgcctgcctctggctctctatcctcaggtgcctttctggctgtggaggccaaa
ggttccccttgccaagaaatgccccgccagtcttccaacgacacagattctgtgcccact
acaagccctgtagggccttcagaaagtggtgtcaacagggtttgtgacactgttataaca
catccaataaaacccggccatgctccttcattaagcgtctgcagtacccccattgcagcg
gctagccacaacatcgcgcgacagagtcaggagaggtcagcccgactccgtgcaaacgtt
tcaccggctgcagctttaggaaaactatctaacacacaatcgtcatcatcccactcaacg
gtgggggaggcaaatccctccaactatagcaatgtctggtcaggcgcatctaaaccattg
tcaacatcgctaacaacaagagaaagtcagagagagaaagttccctcgtcaatatcgctg
acaacaagagacagggagagagagaaagttccctcgtcaatatcgctgacaacaagagac
agtgagagagagaaagttccctcatcaacatcgctaacaacaagagacagtgagagagag
aaagttccatcgtcaatatcgctaacaacaagagaccgggagagagagaaagttccctcg
tcgacattgccaacaacaagagacagggagagcgagaaggttccctcgtcaacatcgcta
acaacaagagacagtgagagagagaaggttccctcgtcaacatcgctaacaacaagagac
agggagagagagaaagttccctcgtcaacatcgctaacaacaagagaccgggagagagag
aaagttccctcgtcaacatcgctaacaacaagagacagggagagagagaaagttccctca
tcaacatcgctaacaacaagagacagggagagagagaaagttccctcgtcaacatcgcta
acaacaagagacagggagagagagaaagttcccttaacatccctggacctcaggttggtc
cagaataaccctaatagtccctctctcaggacatccggtcccaaatcagtcaacaacatt
tcaacagacagtcctctatccagcagtagcagcaggctcagagtcaatgacaaagtccag
aagaccagctgcactgcacccaaaatgaaggggctcaacatcaagagtaaaaccaaaccc
caggagcaactttccccaaaaccagccagagcagaaagtccgttggttctgaggaaagcc
aacaacacttctccgctccagtcccccaaactgcaagccaagaaggtgggctcccccctg
caaaccaggaacgtcgattcccctctgcttaccagaaaggcagccgtaaccagcagccta
aagagtaaacagcaagaccggagcagcagcagtagtagccctgccacgcccgtaacagat
ggaggacaggacaaccccacaaccactactacgccagaaacaatcagccaatcacaatca
attaccaagatgaaggtagaggagcaacgtctacacaaagaggtggagcaagggattttg
gcagtggccaagtcaaaagaacgaccagagccagtcctaactacccagaggaccttcatc
gaggtgcgactctcatcctcatctccctcctccacgcctacaccagttctggcaccaaag
gaagctgtgtattcaaacgattactcaattcctcataccaaaaatattactcaacacaag
gatcaggtcaatggaaatccagtagagaccagtctatggtcaggaacccctgcaacccct
ggctcggtgtgtaatcttgaaaaagtcaacaacactaccagtgaatcagcagtgaactca
atagtcctagaatccgtagatggggttcctttgcctatgagcaatggtcccacagacatc
tctcacatgaactgtagaataacagagacggatgaaactgagagcctcaaagcaaacaag
tccaaactgaaggcgatggagcgtcgtagtttctccacagacaacagcgtctcaggggac
ccaaaccccttctctgtccgccagaggatcaagtcctttgagaacctggccagcttcgac
aagccagtgctcaaatgcatcgacatccagtcctttgctcagtcctatgctctgacagca
acgttgaagccgcctctcaaccggagactgtctggctacatgtctggatcggtgagctcc
atagactgtcgttcgctacgaaggagcttcagttcgtgcatcgacaacttcaacgcatta
acccccttgaccccaatgtcgcctcagcttcgcaagtcaccgtcgagcctgaccctcaca
aactttgacctgttgacgcaaagctgcagcactagcgaagctcccctcggacatatccag
gacaaacttggagatggagaaagtcccagaatctccccaggagttgtaaccctaacccct
cagacgcctccggtgatgcggagtcgccaggcccgaggtcatgccaacctgtcccggtcc
agactgagggagctcagggcccttagcatgcccgacctggacaagctctgcaccgatgac
ttctccagcgacccagggaccaacgccaccattaacacgtcgctggagatacacccagcc
aggcccacagaggtcgttcagaaccaaacagggtgctgttccccgcctgctaaccccacc
ggggtgcacccgaccagggccagccgggcggatgccggggccagcctggaccccattcag
aggaaaaccaactgtcagcaggcagatattcagaactggtccatcagtttgacagtggtg
gctagctctccggtggagcagagtaagctgcaggcggtcctggcctccgtgaccaccaag
acagacgtgttggcactgctacaggaggccaaggctctctctgaggataaagatgatacc
cactttgtagtcttctccaaagaagagggatccggacttggtttcagcatcgctggtgga
atggaccttgagcagaagtccataactgtccatcgggtgttctctaaaggcgtggccggc
ctggaaggaaccattcagcgtggggacagtatcctgtccatcaacggcagcagcttggag
gggatgtcccacgtagaagccgtgtcctgtctccaccatgctagactgtcctctcaggtc
ctggtggttattcgcagggggaaggacagtgaaggacagatgtccccgagacaacatgac
ctgtcccaccacaccggaagaagctactccctgggatgcagagagaaccggcctgagacg
actagatctgttatgggactgggagtggtggaggtgggtcctgacggggctctgagggtg
gagctgctgaagacgtcagctggtctgggctttagtctggaggggggcaaagcctcgtca
caaggagacctacccctcaacgttaaacgagtcttcaaaggtggtgctgcggagctgtcg
agggtggtggacgtgggggacgaggtactggaggtcaacggacgctcgctgcagggcctc
atgcattacgacgcctggaacatcatcaaggccgtcagcgaaggccccgtgcagcttgtc
atcaggaaaccgcggacctctgtatga
DBGET
integrated database retrieval system
