Oncorhynchus tshawytscha (Chinook salmon): 112262531
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Entry
112262531 CDS
T05605
Symbol
oclnb
Name
(RefSeq) occludin b
KO
K06088
occludin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112262531 (oclnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112262531 (oclnb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112262531 (oclnb)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112262531 (oclnb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
MIG-14_Wnt-bd
Oxidored_q3
TgpA_N
Motif
Other DBs
NCBI-GeneID:
112262531
NCBI-ProteinID:
XP_042187215
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All DBs
Position
LG12:complement(8533207..8550288)
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AA seq
485 aa
AA seq
DB search
MPSHNKRTSPSYHPGSRRHEHRHKHSEHVSNPAYSFYPEEELLHFYRWTSPPGVMKIISI
IIIIMCVAVFACVASTLAWDYDMSMMGMSGGIGAGMGIGGGGYGGSYGSSYGGGSSYGGG
GIGGGSSYGGGSYGSGTQTDPLAGKGFIIAIAAITFIAVLIIFILVVSRQNASRSPKFYL
GAIIVSAILAILMLIATIVYLVAVNPTAQSSGSVYYNQIIQLCSQYQNQNQAQGIFINQY
LYHYCVVEPQEVIAIILGILVFVGLIILLVFAVKTRQKIRRWGPDRILWEETKVISNSLR
THTIGEWVNNVSGQPDTLVNEYNDKVGGSRNFLDQLPDHRPLYLPGSSDITSSLGGLKSK
LRDYDTGAESGGEDLDEIDFNSEFSAIMNEQERLDYKREFDRDHLEYKELQAELDDLNMG
LADLDKELDRQPEGSPQFLDAMDKYTRMKNMKKSSDYQLKKKRCKHLKAKLSHIKRKVSE
YDRRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcacaacaaacgcacctctccttcctaccatcccggcagcagacgccatgaa
cacaggcacaagcatagcgagcatgtctccaacccagcctactctttctacccagaggag
gagctcctccacttctaccgctggacttctcctccaggggtgatgaagatcatctccatc
atcatcatcatcatgtgcgtagcggtcttcgcctgcgtggcgtctacgctcgcctgggac
tacgacatgagcatgatgggaatgagcggcggcatcggcgccgggatgggcatcggaggc
ggaggatacggtgggagctacggcagtagttatggcggaggctcgtcctacggcggcggt
ggtatcggcggaggctcgtcctacggcggaggtagctacggaagcgggacccagactgac
cccctggcggggaagggcttcatcattgccatagcagccatcaccttcatcgccgtgctc
atcatcttcatcctagtggtgtcgcggcagaacgcgtcccgctcgccaaagttctacctg
ggggccatcattgtgtctgccatcttggcgatactaatgctcatcgctactatagtctac
ctggtggcagtgaaccccacagcccagtcctcagggtctgtctactacaaccagatcata
cagctgtgttcccagtaccagaatcagaaccaagcccagggcatcttcatcaaccagtac
ctctatcattactgcgtggtggaacctcaggaggtcatagccatcatcctgggaatcttg
gtattcgtgggtctgatcatcctgctggtgtttgctgtgaagacgcgtcagaagatcaga
cgttggggcccagacagaatcctctgggaggagaccaaggttatcagcaacagcctgcgc
acacacaccatcggagagtgggtgaataacgtgtctggtcagccggacactctggtgaat
gaatacaacgacaaggtggggggctccaggaacttcctggaccagctgccagaccacaga
cctctgtatctgcctgggagctcagacataacaagttcgttgggaggactgaagagcaag
ctgagggactacgacactggtgcagaatcgggaggagaggatctggacgagatcgacttt
aactccgagttctctgccatcatgaatgagcaggagcgtctggactacaagagggagttt
gaccgggaccatcttgagtacaaagagctgcaggctgagctggatgacctcaacatgggc
ctggctgacctggacaaggaactggacagacaaccagagggcagcccacagttcctggat
gctatggataagtacacccggatgaagaatatgaagaagtcctcagactatcagctgaag
aagaagaggtgcaagcatctgaaggccaagctgtctcacatcaagaggaaggtcagtgag
tatgaccgcagaccctga
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