Oncorhynchus tshawytscha (Chinook salmon): 112262606
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Entry
112262606 CDS
T05605
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112262606 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112262606 (smyd1b)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112262606 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
112262606 (smyd1b)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112262606 (smyd1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
Motif
Other DBs
NCBI-GeneID:
112262606
NCBI-ProteinID:
XP_024294013
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Position
LG12:16561274..16571570
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AA seq
495 aa
AA seq
DB search
MDNIEVFDSPGKGRGLRATKELLSGDVLFSEPPFAAVVFDSLADKICHSCFRRQDKLQRC
GQCKFAQYCDKTCQSAGWKEHKLECGAIKAFGAIGDNFGKAPNENIRLAARIMWRLDKEG
GVMSDMQMTSLDDLENHISDMPEDDLKELKVDIHNFLDYWPRNSKQHRVDDISHIFGVIN
CNGFTVSDQRGLNAVGVGLFPNLCLVNHDCWPNCTVILNHGNQSAVNTVYHSQMRIELRA
LGKIEPGEEVTVSYVDFLNVTEDRQRQLKMHYFFDCTCEHCKGHIKDDLKMGGKEVDGVK
VPEEQVKEVTEYSLQMLQKMDKARLEGNYHEVIKICRECMEKQEPVLADTHIYQLRMWST
ASEVSAYLQFIDEAADYARKMVDGYNKLYHPCNAHLGMATMRAGVTHWQAGKIEVGHGMI
CKAYAILQRTHGPTHPITKDLEAMRMQTEMELRMFRENEYIYKSMREAALKNQPMNMMNE
PMAESVKNLFRRQKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacaacattgaggtgtttgactcacccggaaaggggaggggccttagagccactaag
gagctgctttccggagacgttcttttctcagaacccccttttgctgcagttgtcttcgac
agtcttgcagacaagatctgccacagctgtttccgcagacaggacaagctgcagcgctgt
ggccagtgtaagttcgcccagtactgtgacaagacatgccagagcgctggctggaaggaa
cacaagctggagtgtggagccatcaaggcttttggggccatcggggacaacttcggcaag
gcacccaatgagaacatccgtttggccgcccgcatcatgtggcgcctcgataaagagggc
ggtgtcatgtcagacatgcagatgacctcattggacgatctggagaaccacatcagtgac
atgccagaggatgatctgaaggagctgaaggtggacatccacaacttcttggactactgg
ccacgcaacagcaagcaacaccgtgtagacgacatctcgcacatctttggagtgatcaac
tgtaatggcttcacagtgagtgaccagagaggtctaaatgctgtgggagtgggtctgttc
cctaacctgtgtctggtcaaccatgactgctggcctaactgcactgtcatcctcaaccat
ggcaatcagtcggctgtgaatactgtgtatcactctcagatgaggattgagctgcgtgcc
ctgggcaagatcgagccgggtgaggaggtgacagtgtcctatgtggatttcctgaacgtg
actgaggacagacagagacagctgaaaatgcattacttctttgactgcacctgtgaacac
tgtaaaggtcacatcaaagatgacctcaagatgggaggcaaggaggtggacggggtcaag
gtacctgaggagcaggtgaaggaggtaacagagtacagtctgcagatgctgcagaagatg
gataaggctcgcttggaggggaactaccatgaggttattaagatatgcagggagtgtatg
gagaaacaggagccagtgttggctgatacacacatctaccagctaaggatgtggagcaca
gccagcgaggtatcagcctacctgcagtttattgacgaggccgctgactatgcacgcaaa
atggtggacggatacaacaagctataccatccatgcaacgcccacctggggatggcaacc
atgagggcaggagtgacccactggcaggcagggaagatagaggtgggacacggcatgatc
tgtaaagcctatgccatcctgcagagaacacacggacctacacatcccatcaccaaagac
cttgaggctatgcgtatgcagacagaaatggagctgaggatgtttagagagaatgagtat
atttacaaaagtatgcgggaggctgccctgaagaaccagccaatgaacatgatgaacgaa
cctatggcggagagcgtcaagaatctcttccgcaggcagaagaagtga
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