Oncorhynchus tshawytscha (Chinook salmon): 112262638
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Entry
112262638 CDS
T05605
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like isoform X1
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112262638
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112262638
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Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
TCAD3
SWIM
Motif
Other DBs
NCBI-GeneID:
112262638
NCBI-ProteinID:
XP_042187345
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All DBs
Position
LG12:17332880..17415544
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AA seq
1131 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYNPACRQGQRAGGVLCGGPGSAPGGSGKTHNPESLLDIAARR
VAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEKEICMYSSFNAGGEESGTSGENHEET
QLPFLRGVTLLEGGWVDNVLQVGFHLSGTVTDPATSSQPEIICSVSVSFDRCKITAVTCS
CGNKDIFYCAHVVALALYRVRKPDQVKLHLPISETLFQMSRDQLQKFVQYLISVHHTEVL
PTAQKLADEILSTNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFSKVREMLRMRDSNGARMLTLITEQFMADPRLALWRQQGTTMTDKYRQLWDE
LGALWMCIVLNPHCKTEQKCWWLKQLRRWNSVDVCPWEDGNHGNDLPNLTHSLPQGAHGN
QELRPHRTVFTRAIEACDLHWQDRHLQHIIASGLYANYCYHDNQDGSLFDTRGWPMWHEH
VPTACARVDALRSHGYPREALRLAIAVVNTLRRQQQRQLEHFRRHKKELLHKGITSITNM
EGWVGHPLDPIGTLFSTLTETGRGAEEGANTCLDLSDCSSVVSHAELQRFPVQRLLGEGE
SYVALAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELDDMLVKIFRKQAVF
LLESGPYSGHGEIVHRESVPMHTFTRYLFTSLLPHDAELAYKIALRAMRLPVLESTASSG
DLSRPHHMVSVVPNRYPRWFTLTHIESQQCELASTMLTAAKGDSRKLETVLESIQKNIHS
SSHIFKLGQDAFKIATLMDSLPDITLLKVSLELGLQVMRITLSTLNWRRREMVRWLVTCA
TEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNTTIVRLHLDCHQQENLASSARTLAL
QCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAAATGMSYTQLFTIARYMEHRGYPMR
AYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLS
DILRRCTLTTPGLVSALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRH
YSEFIEFLGKTRETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgagtccagcagcccccggccaagcgactctgctgcaggcccggctacaac
ccggcatgcagacaggggcagcgggctggaggagtactgtgtggcggtccggggtccgct
ccagggggatcgggaaaaacacacaaccccgaatcgctgctagacatagcggcgcggaga
gtcgcggagaagtggcccttccaacgggtggaggaacggttcgaacgtattccagaaccc
gtccagagaaggatcgtgtactggtcctttccgaggagcgaaaaggagatctgcatgtat
tcttcgttcaacgcaggaggagaagagagtggaactagcggggaaaatcatgaagagact
cagctgcctttcctacggggtgtcactctgctggagggcggctgggtggacaacgtactg
caagtcgggtttcatctgagtggtacggtaacagacccggccacgtcctctcagcctgag
ataatctgcagcgtgagcgtcagcttcgaccgctgtaagatcactgcagtaacctgtagc
tgcggcaacaaggacatcttctactgcgcccacgttgtagcgctggccctgtaccgcgta
cggaagcccgatcaggtcaaactgcacctgcccatctcagagacgctgttccagatgagc
cgagatcagctgcagaagtttgtccagtacctgatatcagtgcatcatacggaggtgttg
cccaccgcacagaaactggctgatgagatactgtcaactaactccgagatcaaccaggtc
cacggggccccggatcccacggcaggagccagtgtagatgatgagaactgttggcacttg
gatgaggagcaggtccaggagcaggtgaaactcttcctctctcagggaggataccacggc
tctgggaaacaactcaacctgctgttcagtaaggtgagggagatgcttcgtatgcgtgac
tccaacggtgccaggatgttaacactgatcacagaacagttcatggccgaccctcgcctg
gcactgtggagacagcagggcaccaccatgaccgacaagtacagacagctctgggatgaa
ctaggtgctctgtggatgtgcatcgtgctaaacccccactgtaagacggagcagaagtgt
tggtggctaaaacagctgaggaggtggaacagcgtggacgtgtgtccctgggaggacggt
aaccatggcaacgatctgcccaacctcacccactccctgcctcagggtgcccatggcaac
caagagttgcgtccccacaggacggtgttcacgcgggccatcgaggcgtgtgacctccat
tggcaggaccgtcacctgcagcacattatcgccagtggcctctacgccaactattgttac
cacgacaaccaggacggctcgctcttcgacacacgcggatggcccatgtggcacgaacac
gttccgacggcgtgtgctcgggtggacgccctgcgttcccatggttacccccgtgaagcg
ctgcgattggccattgccgtggtaaatacactacggcggcagcagcagaggcagctggag
catttccgcagacataagaaagagctgctccataaaggtatcacctccataaccaacatg
gagggctgggtgggtcaccctctggatcccatcggcaccctgttcagcaccctcactgag
acgggacggggggcagaggagggggccaacacatgccttgacctttcagactgttccagc
gtggtgagtcatgcggagctgcagcggtttccagtgcagcgtttgctaggcgagggggaa
tcgtacgtggcgctggccgtagagactgctctgattggcttaggccagcagagggtgatg
cctgacgggctgtatgcccaggagaaggtgtgtcgcaacgaagagcagctattagccaag
ctgcaggaagtggagctggatgacatgctggtcaagatcttccgcaagcaagccgtcttc
ctgttagagagtgggccgtacagcggccacggagagattgtccacagagagagtgttccc
atgcacaccttcacccgctacctcttcacctctctcctacctcacgacgctgaactggcg
tacaagattgcactcagagccatgcggttgcctgtgttggagtccacagcctcgtcaggt
gacctgtcgcgaccccatcacatggtgtctgtggtccctaaccgttaccctcgctggttc
acactcacccacatagagtcccagcagtgtgaactggcctccaccatgctgactgcagcc
aaaggtgatagtcgtaagctggagactgtactagagtccatccagaagaacatccattcc
tcatctcacatctttaaactgggccaggatgccttcaagatcgctactctgatggacagc
ctgccagacatcacactgctcaaagtctcactggagctggggctgcaggtgatgaggata
accctgtctacgttgaactggaggaggagggagatggtacggtggttagttacctgtgcc
actgaagtaggggtgtatgcgttggacagcatcatgcagagttggttcaccctcttcacc
ccgaccgaggccaccagcatcgtggccaccaccgtcatgtccaacaccaccatcgtccgg
ctgcacctggactgtcaccagcaggagaacctggcctcctctgcccggaccctggccctg
cagtgtgccatgaaggacccccagaactgtgccctctccgccctcacgctctgcgagaag
gaccacatagccttcgagacggcctaccagatcgttctggacgcggccgccacggggatg
agctacacacagctgttcacgatagccaggtacatggagcacagggggtaccctatgagg
gcgtacaagctagccacgctagccatggctcatctaaacctcagctacaaccaggatacc
cacccagccatcaacgacgtgctgtgggcctgcgctctgagtcactcgctgggaaagaac
gagctggccgccgtcatccccctggtggtgaagagtgtgaagtgtgccacggtgctgtcg
gatattttgcggcggtgcacactgactacgccggggctggtgtcagcactgcacagccgt
aggaactctgggaagctgatgtcactggacaaagctcctctcaggcagctgctggatgct
accatcggggcctacatcaacaccacgcactctcgcctcacgcacatcagcccacgccac
tacagcgagttcatagagttcctggggaagacccgggagacgttcctcatggcccaagat
ggacacatccagttcacacagttcatagacaacctcaaacagatctataagggaaagaag
aaactcatgatgctggtgagggagaggttcggctga
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