Oncorhynchus tshawytscha (Chinook salmon): 112262667
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Entry
112262667 CDS
T05605
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9-like isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112262667
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112262667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262667
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112262667
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112262667
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
112262667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_30
ABC_ATPase
AAA_29
nSTAND1
T_cell_tran_alt
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
112262667
NCBI-ProteinID:
XP_024294111
LinkDB
All DBs
Position
LG12:complement(19915822..19936037)
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AA seq
819 aa
AA seq
DB search
MGVMVVVSCILVFILMDVIVTTVIYLHGSQTAIFTEDGQNFDILHSVLDLWGTLLVRVCL
LLGASIGVLWNRVDGPHRVSALGTLTLLICLTISTYALAKLLILSEQGDLAHQPWFLSLF
SWTCVSALGTVLLWRLLGRTPNTVTEGERGGGGGGHGGSEETERLVETAGENGTEEVEEQ
GQEHGGKKRRRASRKGTQDQTDSGATMGRLLSYCSKDAGLLSVAVLFLLISAVCEAFIPY
YIGQAIDGVVIHKSMEYFTKPLITLTVLALASSIAVGVRGGLFSLTFARLNLRLRNLLFR
SLMRQEIGFFDANHTGDITSRLSSDTTQVSDLISLNINMFLKSMVKGIGFFIFMFGISWK
LTLVTIMGFPFIAVISKVYGEYYKRLTKEVQTALAQANQVAEETISAMKTVRSFANEEQE
ADSYYGRLQVMFQLNKKQALAYALYMWSSCISELVLEVAILFYGGHLVVTEQMSGGGLIS
FILYELELGECLESIASVYTGLMQGVGAAEKVFEYMDRESKHPHDGKEVPDTCKGLVEFK
DVTFSYPTRPETEILKSVSFTLQPGEVTALVGPSGSGKSSCVGLLENFYPPQQGQVLLDG
RQVHTYQHDLLHSQVALVGQEPVLFARSVEQNITYGLTDIPMEAVVQAATKANAHDFITS
LTNGYDTGVGEKGTQLSGGQKQRVAIARALIRNPHVLILDEATSALDAESEHVVQQALNN
KMRQHTVLVIAHRLSTVEKANNIIVINHGCVVEQGPHNQLMAKGGLYCKLVQRQVLGIET
GAEVLNTPEKHSWKSEGGSQRSGPDSSSPSKSECEAPCY
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcatggtagtggtgagctgcatcttggtattcatcctgatggatgttattgtc
accactgtcatctacttacacggatcccagactgcaatattcacagaggatgggcagaac
tttgacattctccactctgtcctggacctctggggtactttgctggtcagagtctgcctt
ctgctgggggcctccataggcgtgttatggaacagagtggacggtccacacagggtctct
gccctggggaccctgactctcctcatctgcctgaccatcagtacctatgccttagccaag
ctgctgatcctgtcggagcagggcgatctggctcaccaaccctggtttcttagcctgttc
tcctggacctgtgtgtcagcgctggggaccgtgctcctctggaggctcctgggaaggact
cccaacactgttactgaaggagagagaggtggtggtggaggaggacatgggggctctgag
gagactgagaggctggtggagacagctggagagaatggcactgaagaggtggaggagcaa
ggacaggagcatggggggaagaagaggaggagggctagcaggaaagggacacaggaccag
acggactcaggggccacaatgggacgtctgctgtcctactgcagtaaagacgctgggctg
ctctcggttgccgtcctcttcctcctcatctctgctgtgtgtgaggccttcatcccctac
tacattgggcaggctatagatggtgttgttattcacaaaagtatggagtactttaccaag
cccctgatcacccttacggtgttggccttagccagctctattgccgttggtgtacgaggt
ggtctctttagtctaacatttgccagactgaatcttcgcctgcggaaccttctcttcaga
tctctgatgcgtcaggagataggcttctttgatgctaaccacacaggtgacatcacctct
cgcctgtcctctgacactacacaagtgagtgacttgatctcactgaacatcaacatgttc
ctaaagagtatggtgaagggcatagggttcttcatcttcatgttcgggatttcctggaag
ctgactctcgtcaccattatgggattccccttcatcgcagtcatctccaaagtctatggg
gagtactacaagagactgaccaaagaggtccagactgccctggctcaggctaaccaggtg
gccgaggagaccatttcagccatgaagacggtacgcagctttgccaatgaggaacaggag
gctgattcctactacggcaggctacaggtcatgtttcagctgaacaagaagcaagcgttg
gcctatgccctctacatgtggtccagttgtatctcagagcttgttcttgaagtggctatc
ctcttctatggcggtcacctggtcgttactgagcagatgagtggagggggcctgatatca
ttcatcttatatgagctggagctaggagagtgcctggagagcatagcatcggtctacacg
ggtctcatgcagggagtgggagcagctgagaaggtatttgagtacatggacagggagtcc
aaacacccacatgatgggaaagaggtccctgatacctgcaaaggactggtcgagtttaaa
gatgtcacgttttcctacccaacacggcccgaaacagaaattctaaagagtgtgtctttc
actttgcagcctggcgaggtgacagccttggtgggaccatcaggcagtgggaagagctcc
tgtgtggggctcctagagaacttctaccccccacaacaaggccaggtgctgctggacggc
cggcaggtgcacacctaccagcatgacctcctccactcacaggtagcacttgtgggccag
gagcctgtcctgtttgcccgttctgtagagcagaacataacctatggcctgactgatatc
cctatggaggctgtggtgcaggcagccaccaaggcaaatgcacacgacttcatcaccagt
ctaaccaatggctatgatacaggagtgggtgagaaggggacccagttgtcagggggacag
aagcaacgggtggccatcgcaagggcactcatccgcaacccacatgttctgatcctggac
gaggccaccagtgcactggatgcagagagcgaacatgttgtccagcaggccctgaacaac
aaaatgcgtcagcacacagtgctggtgatcgcccatcgcctcagcacagtggaaaaggca
aacaacatcatagttatcaaccacggctgtgtggtggagcaggggccacacaaccaactc
atggccaaggggggcctgtactgcaagctggtgcagaggcaggtcctgggcatcgagaca
ggggcagaggtcctcaacaccccagagaagcactcctggaagtccgaggggggtagtcag
cggagtggacctgatagcagcagtcccagtaagtctgaatgtgaagcaccatgctactga
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