Oncorhynchus tshawytscha (Chinook salmon): 112262681
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Entry
112262681 CDS
T05605
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112262681
03041 Spliceosome [BR:
otw03041
]
112262681
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112262681
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112262681
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112262681
NCBI-ProteinID:
XP_024294135
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All DBs
Position
LG12:20302767..20312808
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AA seq
347 aa
AA seq
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MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIFDTAGNDPYCFVEFYEH
RHAAASLSAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFG
PFGRISDARVVKDIATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLAFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFTPFGQIMEIRVFP
DKGYSFVRFNSHEGAAHAIVSVNGTSIEGHMVKCYWGKETPDMISSMQQVQQVPQQNKVG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcctaaaaccctgtatgtagggaacctatctagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgatttttgatactgcaggcaatgatccatactgctttgtggagttctatgaacac
aggcatgctgctgcttcgctgtctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaagaaagacacaagcaatcatttccat
gtctttgttggagatctcagccccgaaatcacaacagatgatgtcaaagctgccttcggc
ccatttgggaggatatcggatgctcgtgtggtcaaagatattgccacagggaaatctaaa
ggctatggttttgtctctttcttcaacaagtgggatgcagagaatgccattcagcagatg
ggtggccaatggctaggtggcagacagatcaggaccaactgggccactagaaaaccccca
gcccctaaaaccacctatgaaaccaacaccaagcacctggcctttgatgaggtagtgaac
cagtcaagccccagtaactgcactgtgtactgtgggggagttagcactggtctaacagaa
caattgatgagacagaccttcaccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatattcctttgtgaggtttaactctcacgagggagcagcccatgcaattgtg
tctgtgaatggtacttcgatagagggacatatggtgaagtgttactggggtaaagagacc
ccggacatgattagctctatgcagcaggttcagcaagttccccagcagaacaaagtgggc
tttgcagcccagccctatggccagtatgcccagtggtacggcaatgcccagcagattggc
cagtatgtccccaatgggtggcaggtacccacctatggcgtttacggccaggcccaggcc
tggaaccagcagggttttcagtaa
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