Oncorhynchus tshawytscha (Chinook salmon): 112262688
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Entry
112262688 CDS
T05605
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112262688 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112262688 (zgc:65851)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112262688 (zgc:65851)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112262688 (zgc:65851)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Ski7_2nd
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
112262688
NCBI-ProteinID:
XP_024294149
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Position
LG12:complement(20673187..20680171)
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AA seq
527 aa
AA seq
DB search
MSYSGDVYSSSSYRKIFGDAPRNSGRMTLGSSPSRLSSGFRSSSANRNYGSPSMLTSSGY
RKVGAGRNFHSSMSDSMDLNQSTAVTNEMKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQQ
NKVLEAEVTMLRQRHTEPSRLHDLYEQEIRELRARVEELTHEKSQMHLDCVQMNETLDRV
KQKLDEETRLREEAEGTLINYRKDVDDATMSRLELEKKVESLLDEIAFLRKVHEEELQEL
QASLQATQVSVEMDMREGKPDLAVALKDIRAQYEVLSAKNQNQAEEWYRSKFASVNEAAA
RNQDQVKHSREELNEYRRQVQARTLEIEALRGHNEALERQMAEMEDRHSNEMGEMQETIQ
QLESALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSTVGGNILQSGY
SGFSYSSGRSYALGSSAPYRMRGAKPEEPEEEEDEEEKEEEEEENEEEGEEGEEGDENAE
ENGNGDEEEEEEEEEEDQKKTDEKNGKDEKDEKKGEKGSAPSKSTKS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagctactccggcgacgtctactccagcagttcctatcggaagatcttcggggacgcg
ccccggaactccggccgcatgaccttaggcagcagcccctctcgcctgtccagcggattc
cgctccagcagcgcaaaccgcaactatggctccccatccatgctcacatcctccggctac
cgcaaggtgggcgccgggcgcaacttccactcctccatgtccgactctatggacctgaac
cagtccacggccgtcaccaacgagatgaaaatcatccgcaccaacgagaaggagcagctc
cagggcctgaacgaccgcttcgtctccttcatcgagaaggtccacaacctggaacagcag
aacaaggtgctggaagccgaggtgaccatgctgcgccagcgccacactgagccctcccga
ctgcacgacctgtacgagcaagagatccgcgagctgagggcgcgcgtcgaggaactgacg
cacgagaagagccagatgcacctggactgcgtgcagatgaacgagacgctggaccgcgtt
aagcagaagctggacgaggagacgaggctccgcgaggaggcggagggcaccctgataaac
taccgcaaggacgtggatgatgccacgatgtcccggctcgagctggagaagaaagtcgag
tcgctgttggatgagatcgccttcctcaggaaagtgcacgaggaggagctgcaggagctg
caggcttccctgcaagccacacaggtgtcagtggagatggatatgagggagggtaaaccc
gacctggccgtggccctgaaggacatccgtgcccagtacgaggtcctgtcagccaagaac
cagaaccaggcggaggagtggtaccgctccaagtttgccagtgtgaatgaggcggccgcc
cgcaaccaggatcaagttaagcatagcagggaggagctaaatgagtaccgcaggcaggtg
caggcccgtaccctggagatcgaggccctcaggggccacaatgaggccctggagaggcag
atggctgagatggaagaccgccacagcaacgagatgggagagatgcaggagaccatccag
cagcttgagtctgccctccgcagcaccaagggtgagatgtcccgtcatttgcgtgagtac
caggacctgttgaacgtcaaaatggccctggacattgagatcgctgcatacaggaagctg
ctggaaggtgaagagtgccgtctgagtacagtgggcggaaatatcctgcagtcaggctac
tctggcttctcctattcgtctggccgctcctacgccctgggttcctctgccccctacagg
atgaggggagccaagcctgaggaaccagaggaggaggaggatgaggaagagaaggaggaa
gaggaagaggagaatgaggaggaaggagaggaaggagaggagggagatgagaatgcagag
gagaatggaaacggtgatgaggaggaagaggaagaagaggaggaggaagatcagaagaag
acagatgagaagaatggcaaggatgagaaggatgagaagaagggagagaagggaagtgct
cccagcaagagcaccaagagctaa
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