Oncorhynchus tshawytscha (Chinook salmon): 112262778
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Entry
112262778 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: ras GTPase-activating-like protein IQGAP1
KO
K05767
Ras GTPase-activating-like protein IQGAP2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112262778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112262778
04147 Exosome [BR:
otw04147
]
112262778
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112262778
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112262778
Exosomal proteins of colorectal cancer cells
112262778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
RasGAP_C
CH
IQ
bZIP_1
SHD1
WW
Motif
Other DBs
NCBI-GeneID:
112262778
NCBI-ProteinID:
XP_024294301
LinkDB
All DBs
Position
LG12:complement(24992052..25077373)
Genome browser
AA seq
1667 aa
AA seq
DB search
MYYEEKANSHKPRYGTIQDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEACVEEELP
STTDLEEGLRNGVYLGKLAKFFAPKMVSEKKIYDRDQARYKRTGLHFRHTDNTVQWLRAM
ESVGLPKIFYPETTDVYNRKNMPKVVYCIHALSLYLYKRGIAPQIQDLLGKVAFTEEEIS
NMRSELEKYGIQMPTFSKIGGILANELSVDEATLHAAVFAINEAVDKGEAAVTIGTLKNP
NAMLRNTGEELAQDYQDTLSRAKASKELQASGRRLSIATEERDVYEELLTQQEIQSCVDL
VNTQVAVRQVNQAISAQNEAALLVGLKVLALGLLGVQEANSHWYLEHFTTYCQVQTRDAG
GAVMLEREEIQRVVISCNDFAEAEKRKLEAITAINSAIRHGVAAETIEELINPEAQLPIV
YQTAANLYQTELFSLQIQGPKAGLGHEELSVAVEMLSAVAVLNEVLDTKEPQAVTEQLSD
SPLGFSNMDHDNLHRYADTLISLRADSLSRGLEFLTWNDVQKTIDTVNLQVHEEHERIIA
ISEINEALSSDDPNQTLSALLLPTAKLQGVNPATAKHYHDVLQNTKLIICKVLPLDTEEM
SSGDESAVLWLNQIQEGIHTANQDEEEALTLAGAVADINREVAAGDSQITLQALQSPLPG
LRGVLSECADTYQTQLGQRQDLNVTTGSSDSVWVKHQIKGGYDYYYNLENREGTWEEPED
FTHNSTQLRREEIQSVVGRVTAEYNREQLWFANEALVTQLQARVRGYLVRRAHVQRLDFL
RQQEPHVVRLQASWKGYKQRKMYKDRMNVLQSNVGTVIKLQSFLKMWRAKSKYSQRLQYF
KDHEKDIVKIQAFLKANKARDDYRTLTGAQDPPLSVVRKFVHLLEQSSLDLLEEQEVTRL
REEVVTKIRSNQQMEKDLNLMDIKIGLLVKNRITLQDVVSHSKKLTVKKSKEELAAGDRQ
GIKALSKDKRKKLEAYQHLFYLLQTNPSYLAKLIFQMPQNKSTKFMDTVIFTLYNYASNQ
REEYLLLKLFKTALEEEIKSKVDQIQDIVTGNPTVIKMVVSFNRGARGHNTLRQLLAPVV
KEIIEDKGLGINTNPVEVYKAWVNQLETNTGEASKLPYEVTPDQAMAHEEVRAKLESSSR
ALRTATDKVLNSIVSSLDNIPYGMRYVAKVLKNSLHEKFPDATEDELLKIVGNLLYYRYM
NPAIVAPDGFDIIDMSAGGQLHSDQRRNLGSVAKMLQHAAANKLFEGENAHMTPMNNYIS
QTYQKFRVFFQAACDVPEPEEKFNVDEYSDMVTLCKPVIYISIDEVINTHSLVLEHLEAI
SPDHNDLLHELLQDLGDMPDVEALLGEGVVDPNNPNKESTLSQLAKTQISLSLTNKFELL
EGDDKDTKGLMMKTKKLIMDVIRIQPGDTLPETLETPASGLQECEHAKVVELRAVQDAQA
PEGLKSSQAVLEDRQLPLEQKKRKILRSLRTLEQAGLVTTGNKYQDLINDISKDIRYQRR
YRQRRKAELVKLQQTLSALNSKTAFYQDQTNYYDTYIRTCLDNLNRKNARRSIKLDRKVE
EKGSKKWHQSLKYTAARLHEKGVILEIEGLQTNQFKNVMFDISPSEEVGDFEVKAKFMGV
EMEKVQLHFQDLLQLQYDGVAVMKMFDKAKVNVNLLIFLLNKKFYGK
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgtactatgaagaaaaagctaattcacacaagccacgttatggaaccattcaggacgat
gagaggctctcggcggaggagatggacgagaggagacgacagaacatcgcctacgagtat
ctctgtcacctggaggaggccaaacggtggatggaggcgtgtgtagaggaggagctgccc
tccaccacagatctggaggagggtctgaggaacggagtctaccttggaaaactggccaag
ttctttgctcccaagatggtgtctgagaagaagatctatgacagggaccaggctcgctac
aagcgcacaggacttcacttcagacacacagacaacacagtgcaatggctacgggccatg
gagtctgtagggctgcctaagatattctatcctgaaacgacagatgtgtacaatcgcaaa
aacatgcccaaggtggtgtactgcatacacgcgctaagcttatacctgtacaaacggggc
attgcaccacagatccaggacctgctggggaaagtggccttcacagaggaggagatcagt
aacatgcggagcgagctggagaaatacggcattcagatgccaaccttcagcaagatagga
ggcatcctggccaacgagctctcggtggacgaggcaaccttgcacgctgctgtgtttgcc
atcaacgaggcggtggataagggtgaggcggctgtgaccatagggacattgaagaacccc
aacgctatgctgaggaacactggggaagagctggcccaggactaccaggacactcttagc
agggccaaggccagcaaggagctccaggcctcaggcaggcgcttgtccatagccacagag
gagagagatgtttatgaggagctgctgacccagcaagagatccagagctgcgtcgacctt
gttaacacgcaggtggcggtgcggcaggtgaaccaggccatctctgcccagaatgaggct
gcgctgctagttgggctcaaggtgctggccctggggctgctgggggtccaagaggccaac
tctcactggtacctggagcacttcaccacctactgccaagtccagactcgggacgctgga
ggtgcagtgatgctggagagggaagagattcagagggtggtcatatcctgtaacgacttt
gctgaggcagagaaacgaaaactggaggccattacagcgatcaactctgccattcgtcat
ggagtagcagcagagactatagaggagctgataaacccagaggcccagctccccatagtc
taccagactgctgccaacctctaccagaccgaactgttcagcctgcagatacagggacca
aaggcaggcctggggcatgaggagctgtctgttgcagtggagatgctgtctgcggtggcg
gtgctcaacgaggtcctggacaccaaggaaccccaggctgtcactgaacagctttctgac
tctcctctgggcttcagcaacatggaccacgacaacctgcacaggtacgcagacactctg
atcagcctcagagccgacagtctgtcccgcggcctggagttcctcacctggaatgatgtt
cagaagaccatcgacacagtcaatctgcaggtccacgaggaacacgagcgtattattgct
atatctgagatcaatgaggcactgagctctgatgaccctaaccagaccctctctgccctg
ctcctgcccacggccaaactgcagggagtcaacccagccacagccaaacactaccacgac
gtcctgcagaacaccaagctaatcatctgcaaggtcttacctctggacaccgaggaaatg
agctcaggggatgagtctgctgtgctgtggctcaatcagatccaagaaggcatacacaca
gccaaccaagatgaagaggaggctctcacattggctggagcagtggcagacatcaacagg
gaggtggcggcgggagactcccaaattaccctgcaggccctccaatcacccctgccaggg
ctgagaggggttctgtctgagtgtgcagacacctaccagacacagctgggccagcgccag
gacctcaacgttactactggcagcagtgacagtgtgtgggtgaaacaccagatcaaggga
ggttatgactactactacaacctggagaacagagaggggacctgggaggagccagaggac
ttcacacacaacagcacacagctccgcagagaggaaatacagagtgtggttggaagagtg
acagcggagtataacagggagcagttatggtttgccaacgaggccctagtaactcagcta
caggctcgggttagaggttacctggtgaggagagctcacgtccagagactggatttccta
cgacaacaagaaccacacgtggtccgactacaggcctcctggaagggctataaacagagg
aagatgtacaaagacagaatgaatgtgctacaaagcaacgtggggactgtcatcaagctt
cagtcgttccttaaaatgtggcgagccaaaagtaaatactctcaaagactgcagtatttc
aaagaccatgagaaagacatagtgaagatccaggctttcctcaaggctaacaaagccaga
gacgactacagaacactcactggggctcaggaccctcctctgtcggtggtgcgtaagttt
gtacacctgctggagcagagcagcctggacctactggaagaacaggaagtgacacggctt
agggaggaagtggtcactaagatccgctccaatcagcagatggagaaagacctcaacctg
atggacattaagattggcctgttggtcaagaacaggatcaccctacaggatgtggtttcc
catagtaagaagctgacggtgaagaagagtaaagaagagctggctgcaggggacaggcag
ggcatcaaggcactgagcaaagacaagaggaagaaactagaggcttaccagcacctcttc
tacctgctgcagaccaacccttcgtacctggccaagttgatcttccagatgcctcagaac
aagtctactaagttcatggacacagtgatcttcaccctgtataactatgcctccaaccag
agagaggagtacctgctgctcaaactcttcaagaccgctctggaggaggagatcaagtcc
aaggtggatcagatccaggacatcgtgactgggaaccccacggtcatcaagatggtggtg
agcttcaaccgtggagcccgtggtcacaacacgctgaggcagctgctggcacctgtggtc
aaggagatcatcgaggacaagggcctgggcatcaacaccaaccctgtggaagtgtacaag
gcttgggtcaaccagctggagaccaacactggagaggccagtaaactgccttacgaggtg
accccggaccaggccatggcacacgaggaagtacgtgccaagctggagtcctccagtcgg
gcgctgaggacagccacagacaaagtgctcaactccatcgtgtcgtcactggacaacatc
ccctatggcatgaggtacgttgcaaaggtcctgaaaaattcacttcatgaaaagttccca
gatgctacagaggatgagttgttgaagattgtagggaacctgctgtactaccgttacatg
aacccagccatagtggctccagacggcttcgacatcatagacatgtcagccggaggtcag
ctccactctgaccagcgtcgcaacctgggctccgtggcaaagatgctgcagcacgccgcc
gccaacaagctgttcgagggagagaatgcccatatgacccccatgaacaactacatctcc
cagacctaccagaagttcagggtgtttttccaggcggcgtgtgacgtccctgagccggag
gagaagtttaacgtggatgagtactctgacatggtgactctgtgcaagcctgtcatctac
atctctatagatgaggtcatcaacacacattcgctagtgttggagcacctggaagcaatc
tcccccgaccacaacgacctgctgcatgagctgttgcaggacctaggggacatgcctgac
gtggaggcactgctgggtgaaggggtggtggatcctaacaatcccaacaaggagagcacc
ctgagtcagctggcaaaaacgcagatctccctcagcctcactaacaagtttgagctgctg
gagggcgatgacaaggacacaaaaggcctgatgatgaaaactaagaagctgataatggat
gtaatcaggatccagccaggagacacactcccagagaccctggagaccccagcctctggc
ctccaggagtgtgagcatgctaaggtggtggagctgcgtgcagtgcaggacgcccaggcc
ccagaggggctgaagagcagccaggcagtgctggaggacagacagctgcctctagagcag
aagaagaggaagatcctccgcagtctccgaaccctggagcaggctggcctcgtcaccact
ggcaacaagtaccaggatctcatcaacgacatctccaaggacattcgttaccagaggcgt
tacagacagaggaggaaggcagagctagtgaagctccaacagacactgagtgcgctcaac
tcaaagacagccttctatcaggaccagaccaactactatgatacttacatcaggacctgc
cttgacaacctcaacaggaagaacgcgcggcggtccatcaagctggacaggaaggtggag
gagaaaggcagtaagaagtggcatcagtctctgaagtacacggcggcccggctgcatgag
aagggagtgatcctggagatagaggggctgcaaaccaaccagttcaaaaatgtcatgttt
gacatctcgcccagtgaggaagttggggactttgaggtgaaggccaagtttatgggagtt
gagatggaaaaagtccaactccatttccaggacctgctccaacttcagtacgacggagtg
gcagtgatgaagatgtttgacaaggccaaagtcaatgtcaacctgctcatcttcctcctc
aacaagaagttctatggaaaataa
DBGET
integrated database retrieval system
