Oncorhynchus tshawytscha (Chinook salmon): 112262780
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Entry
112262780 CDS
T05605
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112262780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112262780
Transporters [BR:
otw02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
112262780
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_3
Pentapeptide_4
DUF6077
Motif
Other DBs
NCBI-GeneID:
112262780
NCBI-ProteinID:
XP_024294304
UniProt:
A0A8C8HCK4
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All DBs
Position
LG12:complement(25084858..25174031)
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AA seq
737 aa
AA seq
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MDDSYDNRTSLVKGAKDIAKEAKRHAMKKANKVVDSATDEYSQRKYSRFEDEVDEGDDLY
HNPLRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAGDRKAREGQVALGQPVT
DSLRERKELEKERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMVGAFFWGGMSDKVGRRQCLLICMCVNGFF
AFLSSFVQGYGMFLLCRVIAGFGTGGVVPIVFSFFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEMKSESGNAVSKALFRSK
TELRGILVNFMKCFDYPLKENTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
IHSNERIEDFTFNFTLENQIHTNGVFISDRFLNMKLKSVTFIDSTFRNCYFDDVTSVGSY
FRNCTFLEAFFYNTDIDESKLIDGTEVINSSFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISA
WNSLDVVTTESFPTDRRGTGFGFCNALCKLAAVLGNVIFGSLVGITKAIPILLASSVLVC
GGLVGLRLPDTRANVLM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctacgataacaggacttccttagtgaagggggccaaggacattgccaag
gaggccaagcggcacgccatgaaaaaggccaacaaggtcgtggacagcgccacagacgag
tactcccagcgaaaatacagccggtttgaggacgaggtagatgagggggacgacctttac
cataatcccctgaggcaggacggaggctacaatgacaatgaccaggccagtgatgccagc
gatgccacagagggccatgatgacgaagatgagatttacgagggggagtaccaggggatc
ccagcggctggagacaggaaggccagggaggggcaggtggctctggggcagcccgtcaca
gacagcctcagagaacgtaaggagctggagaaggagaggcaggcggacgaggaagaactg
gcccagcagtatgagctgatcatccaggagtgtggccatggcaggttccagtggcagctg
ttcctggtgctgggcctggccctcatgtcggatggggtggaggtgttcgtggtggggttc
gttctgcccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatggtgggggcatttttctgggggggcatg
tcagacaaggtgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctgtcctccttcgttcagggctacggcatgttcctgctctgccgtgtgatcgca
ggctttggaacagggggggttgtgcctatagtcttctccttttttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctgtgcatgttctggatgattggagagatc
tatgcttcagccatggcctgggccattataccacactacggctggagtttcagtatgggt
tcggcctaccagttccatagttggagggtgtttgtggtggtctgcgccctgccctgcgtc
tgtgctgtggtggctctcacctttatgcctgagagccccaggttttacctggaggtgggg
aagcatgacgaggcttggatgatcctcaaacagatccatgacaccaacatgcgagcgcgt
gggcagccggagaaagtcttcaccgtgaacagaatcaagatccccaagcatctggatgag
ctggtggagatgaagtcagagtcggggaacgcagtctccaaggccctcttcaggtcaaag
acagagctacgtgggatcttggttaactttatgaagtgttttgactaccctctgaaagaa
aacactatcaagctggctattgtgtggtttacactgtcatttgggtactacggcctgtct
gtgtggttccctgacgtcatcaagcaccttcaggcagacgactacgcctccaaggtgaag
atccacagcaacgaacgcatcgaggacttcaccttcaacttcaccctggagaaccagatc
cacaccaacggggtcttcatcagcgacagatttcttaatatgaagttgaagtccgtcacc
ttcattgactccaccttccgtaactgctactttgacgacgtgacgtcggtgggatcctac
ttccggaactgtaccttcctcgaggcgttcttctacaacactgacatcgatgaatcaaaa
ctgatagacggcacagaggtgatcaacagctcgttccaccacaacaagacgggctgtcag
atgacgtttgacgacgactacagcgcctactgggtctactttatcaacttcctgggaact
ctagctgttctacccggcaacattgtttctgcactgctcatggataagattggacgcctt
tcgatgttaggtggctccatggttctgtcagggatcagttgtttcttcctgtggttcggc
accagtgagtcgatgatgatcttcatgctgtgcctttacaacggcttgagcatatcagcc
tggaactcactggacgtggtcaccacagagtccttccctacagacaggagggggacaggt
tttgggttctgtaatgctctgtgtaagttagctgccgtgttggggaacgtgatctttggt
tcgctggttggcatcaccaaggccatccccatcctcctggcctcatctgtgctggtgtgt
ggaggtctggtggggctccggctgcctgatactcgggccaacgtcctcatgtag
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