Oncorhynchus tshawytscha (Chinook salmon): 112262808
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Entry
112262808 CDS
T05605
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112262808
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112262808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112262808
03009 Ribosome biogenesis [BR:
otw03009
]
112262808
04131 Membrane trafficking [BR:
otw04131
]
112262808
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112262808
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112262808
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112262808
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112262808
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112262808
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112262808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
AAA_28
Vps4_C
nSTAND3
Parvo_NS1
AAA_18
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
ATPase
Bac_DnaA
DUF815
ABC_tran
AAA_24
NB-ARC
ResIII
TsaE
Viral_helicase1
Zeta_toxin
Sigma54_activat
NACHT
SLFN-g3_helicase
bpMoxR
KAP_NTPase
UFD1
Zot
Motif
Other DBs
NCBI-GeneID:
112262808
NCBI-ProteinID:
XP_024294351
LinkDB
All DBs
Position
LG12:complement(26085590..26096858)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLNDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWGDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSQGTGGTGGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagaatccaaaaatgatgatctttccactgcgattctgaagcagaag
accagacctaacagattgattgttgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctgtttcgtggagacacagtgctgatgaag
gggaagaagcgcagggagtcagtatgtattgttttgtctgacgacacctgctctgatgag
aagatccgcatgaaccgtgtggtccgcaacaacctccgcgtccgtctgggggatgtcatc
agtatccagccgtgtcctgatgtgaagtatgggaagaggatccacgttctgcctattgat
gatacagtggagggaatcactggcaatctatttgaggtctacctcaaaccctacttccta
gaggcctacaggcccatccgcaagggtgatatcttcctggttcgggggggtatgcgtgcg
gtggagttcaaggtggtggagactgaccccaacccctattgcattgttgcccccgatacc
gtcatccactgcgagggagagcctatcaggagagaggatgaggaggagtccctgaatgag
gtgggctatgacgatatcggaggagtgaggaagcaactggctcagatcaaggagatggtg
gagctgccactcagacaccctgcactattcaaggctataggagtcaagcccccccgtggt
atcctgctgtacggaccccccggtacaggaaagaccctgattgccagagctgtcgctaat
gagactggagccttcttcttcctcatcaacggtcctgagatcatgagtaagctggctgga
gagagtgagagcaacttgaggaaggccttcgaggaggctgagaagaactctcctgccatc
atcttcattgatgagctggacgctatcgctccaaagagagagaagacccatggagaagtg
gagaggcgtatcgtgtctcagttgctgaccctgatggacgggctgaagcagagggctcat
gtcattgtcatggcagccaccaacagacccaacagcatagacgctgcacttaggagattt
gggcgttttgacagggaggtggacattggaatccctgatgcaacaggcagactggaaatc
ctgcagatccacaccaagaacatgaaactgaatgacgatgttgaccttgaacaggtggct
aatgagacccacggccacgtgggtgctgacctggctgccctgtgctctgaggcagctctc
caggccatcaggaagaagatggacctaatcgacttggaggacgagaccatcgatgcggag
gtcatgaactccctggccgttaccatggacgacttcaggtgggctctgagccagagtaac
ccatcagctctgagggagacggtggtagaggttcctaacatcacctggggggacattgga
ggactggaagatgtcaagagggagttgcaggaactggtgcagtacccagtggagcaccct
gataagttcctgaagttcggtatgaccccgtctaagggagtgttgttctacgggcccccg
ggttgcggtaagaccctgctggccaaggccattgccaacgagtgccaggccaacttcatc
tccatcaaaggacctgagcttctcaccatgtggttcggagagtctgaggctaatgtcagg
gagatctttgacaaggctcgccaggcagccccgtgtgtgttgttctttgacgagctggac
tccatagcgaaagcccgtgggggtaatgtgggagacggtggcggagcggccgaccgtgtc
atcaaccagatcctgactgagatggacggcatgtccagcaaaaagaacgtcttcatcatc
ggcgccaccaatcgccctgacatcattgaccctgccatccttcgacccggccgtctggac
cagcttatttacatccctctgcctgacgagaagagcaggatcaacattctcaaggctaac
ctccgaaagagccccattagcaaggatgttgatctggacttcctggctaagatgaccaat
gggttctcgggtgctgaccttacagaaatctgccagcgggcctgtaagctggccatcaga
gagtgcatcgagaatgagattcgccgagagagggagaggcagaccaacccttctgctatg
gaggtggaggaggatgaccctgtgccagagatcaggaaggaccactttgaggaggccatg
cgattcgcccgccgctccgtcagcgacaatgacatccgcaaatacgagatgtttgcccag
acactgcagcagagccgaggctttggcagcttcaggttcccatccagtgctgcagggggc
agtggtccaagccagggtaccgggggaacaggcggggggccagtgtttaacgaggataac
gatgacgacctgtatggatag
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