Oncorhynchus tshawytscha (Chinook salmon): 112262826
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Entry
112262826 CDS
T05605
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112262826 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112262826 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262826 (usp30)
04121 Ubiquitin system [BR:
otw04121
]
112262826 (usp30)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112262826 (usp30)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112262826 (usp30)
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112262826 (usp30)
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112262826 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
112262826
NCBI-ProteinID:
XP_024294373
LinkDB
All DBs
Position
LG12:complement(26516774..26532227)
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AA seq
504 aa
AA seq
DB search
MPWCRSATSEKLIREFLYSGTIVRNKIMKNWGVIGGIAAAMAAGVYVLWGPITDSKKRKK
GMVPGLLNLGNTCFMNSLLQGLAACPSFVKWLEEFTSRKGVSEGEPEKDPKLSTTLLQLL
QALSNDNTGEEDVLDAGRLLEVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVT
HLFDIQSLESLPDIDDKTLSCKSRGPLHPLRSPWKFPHPFHGRLTSNMACKRCEQQSPVR
YDSFDSLSLSIPSPQWGWPISLDHCLQHFISSETIKEVECENCTKLQQGTLVNGHVLESQ
RTTFIKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQISEYLSMDHYKHCATIQRLQ
VINCTPKTIKAEDSGEAADKTPLNGKDIEHHNNNKPLSNGTCSSVFLHSSGLNPQVNLTY
DYSSSEYNFQLMAVLVHHGDMNSGHFVTYRRCPPSPHSPSPFSSQWLWVSDDSVRKASLQ
EVLSSNAYLLFYERVRRLRLLLEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggtgcagatcagcgacatctgaaaagcttattcgggagttcctgtactctggt
accattgtcaggaataaaattatgaaaaactggggagtcattggtggaatagcggctgcc
atggctgctggagtatatgttctatggggtccaattacagacagcaagaaaaggaagaaa
ggcatggtaccaggcctgctgaacctgggaaacacctgcttcatgaactctctgctccag
ggcctggcagcctgcccatccttcgtcaagtggctggaggagttcactagccgcaaaggt
gtgtcggagggcgagccagagaaggaccccaaactttccacaactctcctgcagcttctc
caagcactgtcaaacgacaacactggggaggaggatgtgctggatgcagggcgtctgctg
gaggtcctcagactctacaggtggcacatcagttcctttgaggaacaggatgcccatgag
ctcttccatgtcctcacctcttccttggaggaggagcgagaccgacagcccaaagtcacc
cacctctttgacattcagtcccttgagagtctcccagatatagatgataagaccttaagc
tgcaagagtcgaggccctcttcatcctttacgaagtccttggaagtttccacatcctttc
catggccgcctaacaagcaatatggcttgcaagcgttgcgaacaacagagtccagtgcga
tatgactctttcgacagcctctccttatccatcccttcaccgcaatggggctggcctatc
tctctggatcactgtctccagcatttcatctcttcagagaccattaaagaggtggagtgt
gaaaactgcaccaagcttcaacaaggcaccttggtgaatgggcatgtcctggaaagccag
aggacaaccttcatcaaacagcttaaactgggaaagctcccacagtgtctctgtattcac
ctgcagagactgacatggtctaatgagggtacgcccataaagagacaggaacatgtccag
atctcagagtacctgtcgatggaccactacaaacactgcgcaaccattcagaggctccag
gtcatcaactgtactcccaaaaccattaaagcagaggattcaggagaggctgcagataag
acccctctcaatggcaaagatatagaacaccataacaacaacaagccactgtccaatgga
acctgttcgtctgtctttctccattcttctgggttgaacccacaggtcaacctcacatat
gactacagctcctcagaatacaactttcaactgatggctgtgttggttcaccatggtgac
atgaactcaggacactttgtcacttaccgccgctgccctccctcgccccacagcccctct
ccattcagctcccagtggctgtgggtttcagatgactctgtacgcaaggccagtctgcag
gaggtgctgtcctccaacgcctacctactcttctatgagcgggtgagacggctccgtcta
ctgttggaggagtag
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