Oncorhynchus tshawytscha (Chinook salmon): 112262847
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Entry
112262847 CDS
T05605
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112262847 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112262847 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112262847 (spaw)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112262847 (spaw)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
112262847
NCBI-ProteinID:
XP_024294405
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Position
LG12:27627903..27631324
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AA seq
420 aa
AA seq
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MECLAWLVLCALLICFFRLGSSEKLSHHSRYHKSAPESSLGNLNSYHPSRYPLYMMQLYR
SFKAADSSQSTAVNTVSAADASHLLRHSDSVISLIAKGCHQVGEKWTVTFDMSSISATDD
VQLSELRVRLPAFSASKRVILDIYHSRKQDCESDTEMCRDERLLLGSFGASPSDTKSPLN
VFNVTALLKYWLHQGDAVTESQEAGVGDVMEEDHGSGVDGEIDMPYIKHFTHRRRKVHHP
TAERVMMVVFSKHNLPRDGESVPTLIRTVEHSKYAILDQVSDEAQGRRHKRNRMERVRMA
GGIAANATGSLAEAVQRPLCRKVDMWVDFDQIGWNEWIVYPKRYNAFRCEGECPTPVDES
FSPTNHAYMKSLLRLYHPDRVGCPSCVPTRLSPLSMLYYGDEDLVLRHHEDMIVEECGCH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcttggcatggctcgtcctttgcgcgctcctcatctgctttttcaggcttggc
agttcggagaaactgtcgcaccattcccggtatcacaagagcgcacccgagtccagttta
ggaaatctaaattcgtaccatcccagcaggtaccctctctacatgatgcagctgtaccgc
tccttcaaggctgcagactcctcacagtccacggctgtcaacaccgtcagcgcagccgat
gccagccacttactgcggcattctgactcagtcatcagtctcatagcaaaaggttgccat
caagtgggtgagaaatggaccgtcactttcgacatgtcctccatctctgcgactgacgat
gtccagctgtcagagcttcgggtcagactaccagctttctccgcctccaagcgcgtcata
ttggacatttatcactcgcgaaagcaggactgcgagtctgacactgaaatgtgccgcgac
gagcgccttctcttgggcagctttggcgcatcgcccagtgacaccaagtctccgttgaac
gttttcaatgtaacagctctgctcaaatattggttgcaccagggagacgcagtgacggag
agtcaagaagcaggagttggagatgtgatggaggaagatcacgggagtggggtagatgga
gagatcgacatgccctacattaagcattttacgcacaggcgaaggaaggttcaccatccg
acagccgaacgggttatgatggttgtcttctccaagcacaacctgcctcgggatggcgag
agcgtacccactctcatccgtactgtggagcactccaaatacgcaattttggaccaagtc
agcgatgaagctcaagggcgacgccacaagagaaaccgaatggagagagtgcggatggct
ggcggaattgcagcgaacgctactgggtcactggctgaagccgtccaacgcccactatgt
cggaaggtggacatgtgggtagatttcgaccagatcggctggaacgagtggattgtgtat
ccaaagcgctacaacgcgttccgttgcgagggcgagtgccctactccggtggatgaatcc
ttcagtcccaccaaccatgcatacatgaagagcctgttgagactgtaccatccggatcgt
gtggggtgtccctcctgcgtgcctacgcgcctcagcccgctgtccatgctgtactatggt
gatgaagacctggtgttacggcatcatgaagacatgatcgtggaggagtgtggctgtcac
tga
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