Oncorhynchus tshawytscha (Chinook salmon): 112262855
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Entry
112262855 CDS
T05605
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112262855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112262855
Spliceosome [BR:
otw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112262855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112262855
NCBI-ProteinID:
XP_024294422
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All DBs
Position
LG12:complement(27954118..27958295)
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AA seq
494 aa
AA seq
DB search
MVSVKREREIDLEDDEVPVKIGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHIN
VYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV
LKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLRNY
FLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQ
ITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKVAL
LLKEEYQEEMSDTTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTY
KENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVTEK
NTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWK
RRESEDDTTNHTGA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgtaaaacgggagcgagaaattgacttggaagacgatgaagtacctgtgaaa
attggccgttcgtccgaggaccgcagaagtcgccattgtccctacctcgacacaatcaat
aggagtgtactggacttcgattttgagaagctatgctccatttccctctcccacatcaat
gtatacgcctgtctcatctgtgggaaatacttccaaggtagaggtctgaagtcccatgcc
tacactcacagtgtgcagttcacccaccatgtgttcctcaatctgcacaccctcaagttc
tactgtctaccagataactacgagatcattgactcatcgttggaagacatcacgtatgta
ctgaagcccacattcaccagacagcacatctctggattggataagcagggaaagctgtat
cgagcctatgatggcaccacctatctgcctggcatcgtagggctcaacaacatcaaggct
aatgactatgctaatgtggtgctgcaggccctgtccaatgtgcccccactgcggaactac
tttttggaagaggagaattactgcggcatccgtaggccgccgggtgacatcatgttcctg
ctggtgcagcgattcggtgagctgatgcgcaagctgtggaacccacggaacttcaaggcc
catgtgtcgccccacgagatgttgcaggccgtagtgctgtgcagcaagaagaacttccag
atcaccaagcaaggggatgctgtggacttcctgtcatggttcatgaatgctctgcacggt
gcactgggaggaaccaagaagaaaccctcaagccttaccaaagtgttccagggttccatg
cgtatcttctccaagaagcttcctcacccagatttgccaccagaagagaaggtggctctg
cttctgaaggaggagtaccaggaggagatgtctgacaccaccttcctcttcttgaccctt
gacctccccacagctccgctgtacaaggatgagaaggagcagctcatcatcccacaggtc
cccctcttcaacatcctggccaagttcaatggcaacacagagaaggagtataaaacatac
aaagagaatttcctcaagaggttccagttgctcaagctgcccccctatctcatcttctgc
atcaagaggtttaccaagaacaatttctttgtggagaagaaccccaccattgtcaacttc
cccatcacgaacgtagaccttcgtgagtatctgacagaggaagcacaggtcacagagaag
aacacaacctatgacctggtggccaatgtggtgcatgatgggaagcccactgagggggca
tacagaatacatgtcctgcatcatggcactgggaagtggtacgagctccaggacctgcag
gtgacagatatcctgccccagatgatcacactgtcagaggcttacattcagatttggaaa
agaagagagagcgaagatgacacaactaaccacactggggcatga
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