Oncorhynchus tshawytscha (Chinook salmon): 112262870
Help
Entry
112262870 CDS
T05605
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262870 (hip1rb)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112262870 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
112262870
NCBI-ProteinID:
XP_024294449
LinkDB
All DBs
Position
LG12:complement(28319083..28360774)
Genome browser
AA seq
1068 aa
AA seq
DB search
MNSIRQVPSRVKTKRTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTHR
EKGAFTFWSYALGLPLSSNSILSWKFCHVVHKVLRDGHHNSLQDCMRHHSNIVETGQLWG
NLHDRYGQLVALYAKLLCTKMEFHVKHSEIRANLEVTDEVLERVAGTDINNVFQLTVEVF
DYLDTELRLAETVIRQLNTSIAISTLTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMMYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPDEDEPEQVDDDDDDPEPLINVSDVTVPSMAVPQQFDIFDQTFGPANGGFDDRDI
QIENLKRDLELLRTDLERVKGEAQRYITQLKSQINSLEAELEEQRVQKQRALVENEQLRM
ELEATRRRNAEHESVQATFGEAETRAQATEQRYNKLKEKHTELVSSHAELLRKSADTVKM
LSATQQTQEEVERTKQQLAFEVDRIKQDADMKLEEQKFEMEKLKREFEEKKAEVERVKGT
LQSNEKVGEQQTRSMSALQAEKERLMHSVSEKEAALSALRHAAQLQQSSLQQERERSTRE
LGELQGRLQEKSSREEQLQQKLLEEQFSLLQGTVSEAESIIQDAVAKLDDPLHIRCTSSP
DYLVSRADATLGSIDKVKRGHSDYLTNMGDVGGLLRALTQFSHLAADTIINGSATAHMAP
TDHADRLTENCRGCATQSLQFLKDLKSKASLQRADPASIRIVVQKILRLGEELRPKGVDV
RQDELGDLVDKEMAATSAAIEEAVRRIDEMMNQARKDTSGVKLEVNERILYSCTDLMKAI
HLLVLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVV
LHTGKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRRVNEMAANVVASTK
TGQENLEDKDTMDFSGMSLIKLKMEEMESQVKVLELENQLGNERLRLGELRKKHYDIAGV
PAAGLSEGNGLAPSSASEPSSPKPSKPSIMRKPALAQKPNLPPKNMFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacaggtgccttcaagggtgaaaaccaaaaggaccgaaacgaattta
ggtgctgagagggaacattttgataaacagcagctcagcagcatcagcaaagccatcaac
tccaacgaggcgcctgtgaaagagaaacatgcacgccggatcattctggggacccacaga
gagaagggagcctttaccttctggtcctatgccttgggcctccctttgtccagcaactcc
atcctcagctggaagttctgccacgtggtgcacaaagtgttgcgggatggccaccataac
agccttcaggactgcatgagacatcacagtaacatagttgaaacagggcaactatggggc
aaccttcatgacagatatggccagctggtggctctctacgctaagctcctctgcacaaag
atggagttccacgtgaagcattctgaaatccgagccaacctagaggtaactgatgaggtt
ctggagcgcgttgcaggaacagacatcaataatgtgttccagctcactgtggaagtgttt
gattacctggatacagagctgaggctagctgagacagtgatccggcagctcaacacgtcc
attgccatctctacgctgacgtcaggccagtgtcgcctgtcccccctcatccaggtcatt
caggactgcagtcacctctaccacttcaccgtcaagctgctcttcaagctgcacgcttgt
ctcccagcagacaccctgcaaggacatcgtgatcgtttccatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgatgtacttcaagagactcatccagatcccc
aagctgccagaatcccctcctaatttcctgcatgcggcttccctggccaagcatgcgagg
ccagtggtggtcatcccagacgaggatgagcccgagcaggtggatgatgacgatgacgac
cctgaaccgctgatcaatgtcagtgacgtcaccgtgcccagcatggcggtgccacagcag
ttcgacatatttgatcaaacctttggacctgccaatggtggttttgatgacagggatatc
cagattgagaacctcaagcgggacttggagctattgaggacagatctggaaagggtcaaa
ggagaggcccagcgctacatcactcagcttaagtcccagatcaacagtctggaggcggag
ctggaggagcagcgggtgcagaaacagcgtgccttggtggagaacgagcagctgcgcatg
gagctggaggccacgcgccgccgcaatgctgagcacgagagtgtgcaggccaccttcgga
gaggctgagacaagagcccaggccacagagcagcgctataacaagctgaaggagaagcac
actgagctagtgtctagccatgcggaactgctcaggaagagtgcagacacagtgaagatg
ctgtcagccacccagcagactcaggaggaggtggagaggactaagcagcagttggctttt
gaggtggatcgcatcaaacaggatgctgacatgaagcttgaggagcagaagtttgagatg
gagaagcttaaaagagagtttgaggagaagaaggcagaagtggaacgtgtcaaaggcact
ctgcagagcaacgagaaggtgggggaacagcagaccagatccatgtccgccctgcaggcg
gagaaggagcgtctgatgcactctgtgagtgagaaggaggcagcactgtcagccctgcgc
catgctgcacagctgcagcagtcgtccctgcagcaggagagggagaggagcaccagggag
ctgggagagctgcagggcaggctgcaggagaagtctagccgtgaggagcagctgcagcag
aagctgctggaggagcagttctctctgctgcagggaacggtctctgaggctgagagcatc
atccaggatgctgtggccaaactggacgaccccctacacatccgctgcaccagctcccca
gattaccttgtcagtcgggcagatgccactttaggctccattgacaaagtgaaaaggggt
cactcagactacctgacgaacatgggagatgttggtgggctgctgagggccctgacccag
ttctcccacctggctgctgacaccatcatcaacggcagtgccacagcgcacatggctccc
accgaccacgcagaccgtctgactgagaattgcaggggctgtgccactcaaagtctgcag
ttcctgaaggacctcaagtccaaggcctctctccagagggcagatccggcttccattcgc
attgtggtccaaaagatcctgaggctgggggaggagctgcgacctaaaggtgtggatgtg
cgacaggatgagctgggagatctggtggacaaggagatggcagcaacatcagcagccatt
gaggaggcagtacgcagaatcgatgaaatgatgaatcaggcacgaaaggacacctctggt
gtcaaacttgaggtcaatgaaagaatcctctacagctgcacagacctgatgaaggccatc
catctactggtcctgacatcaaccgacctacagaaggagattgttgagggagggaggggt
gcagccactattaaggaattctacgccaggaactcccgttggactgagggactcatctct
gcctccaaagctgtgggatggggagccacacagatggttgagtctgctgataaagtggtg
ctgcacactggtaaatatgaggagctcatcgtctgctcacacgagatcgctgctagtaca
gcacagctggttgcttcctccaaggtaaaggcagaccgcaacagtacgaaactgacagct
ctccagcaggcttctcgccgtgtgaacgagatggcggccaatgtggtggcctccaccaag
acaggccaggagaacctagaggacaaggataccatggacttctctggaatgtccctcatc
aagttaaaaatggaggaaatggagtcgcaggtgaaggtgttggagctagagaatcagctg
ggtaatgagcgtctgcgtctgggagagctcaggaagaagcactatgatatagcaggtgtt
ccagcagcaggcctctcagagggcaatggcctggccccctcatctgcctctgagccctcc
tcacccaaaccctctaagcctagcatcatgaggaaacctgccttggctcagaaacccaac
ttaccacctaaaaatatgttcaggtag
DBGET
integrated database retrieval system
