Oncorhynchus tshawytscha (Chinook salmon): 112262871
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Entry
112262871 CDS
T05605
Symbol
kntc1
Name
(RefSeq) kinetochore-associated protein 1 isoform X1
KO
K11577
kinetochore-associated protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112262871 (kntc1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
112262871 (kntc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rod_C
KNTC1_N
ARM_KNTC1_3rd
ARM_KNTC1_1st
ARM_KNTC1_2nd
Motif
Other DBs
NCBI-GeneID:
112262871
NCBI-ProteinID:
XP_024294452
LinkDB
All DBs
Position
LG12:complement(28369571..28392258)
Genome browser
AA seq
2206 aa
AA seq
DB search
MWNDVELLINEDTNTGRLCNVREENSGLYQVDTLVKIASTEKVLSDPQLYSSSSSNCSIV
VADSTVILFDLSYQTMLLHLDFDSDVDTVDDCLDGHFLVVCERNGNLHLIYVPQKSTLLT
IALLKNVPSGKEKTYRHLILQEDKTSFGMYHLFLLTQDGFFHITNLALEKIQIAIEKMDI
GALKELQSRFKTDFCSTKEIHGGGCNTAVMCNLGNEIHLMIGADGEAVLTHWRLDHSQGT
MSLCQSLDSSLIPGVRKILVVDNLMYVLSTENILSLWDLHFLVMVCCWPDLSIHDFLLIT
ECDSASIATQESASTKIITLTMQDKSQMRSLQVRSLPSMTVLYSLEVSSTACLVQTRIST
DTIYLLEGIYENSRNSEEHISSVVMRCFTEALPENRLSRLLYKHKFEEAEKFAIAFELDV
ELVYKVKLDFVLEQLASASVGGNGQDVWSDLVEEAKTNLMKIMDEQYVVEYCLKAPWPTF
DTAEKMLNHAASRCPSSQIQEALARLATFCCLHSLDKFNGISWIEFLNITDYVGDMLSHL
REGDLKGAQHLWLRHEGEIAVQFDERVLDALLSSFPEDLPSQDLCLWLRSVIVPFVRRVV
PRGQKIVARWLEQRARILELTEKGDWPQNGLNLAELGLPSLWMWIPSEDDYGSEEVEHLK
SLVSNLRQLLDLYNKYNCRLSLSVFEKASVRSVAFLMLDKVPAPELIPATVEGSVRPYSL
EHQLPLDELLLQYIKDLLERCSSQTTTLFTEWEAKAVAVLGCITDTDLVVDAVLEIMQKA
VVPWTEVVERLVQQHLEMVGPKQELLKESYRLMEMRKLLRGYGIRNFNLSNNTQIMTLVR
YILKQDLPTSLEDSLKLAGAYKLPTSQIHILYLIQLISQSQSEPCVTLLKKIAPEEAECV
IERLANWARLELQDKDHVSEEHKKHQMVVAQVMVEALTFLQRIQKGDAFKSVDCENNLMM
FKAIAHLQEDFDIFLTPNNYEDPKVRKQFQEYHITAYENTRARGPSKSKVTATPMVANDP
DGKTKNISTEAGLRRLARQLQRTEQELWADLALRALGVGKVDKALKILSELYKHHGTTST
GKVLFSAAQKLCQMLEADVPMILPEGVDLPAVIHKLACQAVTVCHSDLLLDCVELCKSTR
AAMDVYHQCQLSDNYGFIAKDLSLAAERDPYSQWSFQDVFKEDCIILDPVSVLPVQYEIT
NCLLPFSSDRKLYPLDCSCLSHCSFQQDANFLNPLLVPLASMHQMLQECSQLELALRLLV
NSFGSCLQHVTSNIMNIKLGIQLYGPQALQKYRACLSDLRTTTLSSINAVAVALLHKVFN
WRVVDCDLAIGLCTLLSKTEVFKILWKVIDNTWQNYDKILAVAMVGAHLCNLYSEQEERK
KFLSVITDAEWGIELGKLGISIQSVFRQCPEMKSNLIPTLVKNKNTTPEIILQYCSTFDL
NRDEVINQYITTLLQEEGGGAADPGAGQGEQPLGHADALERALQVIPMLHSTRNLTISLS
AAILKLSPYNYERIEGVLRIIQTADEQITSISISQAIGLLQHLKSYKRISSPTDLESSHL
LENGLEPSALANIRLPFHLLMQTTSYWKILSPELSEETFPTLLLISKLMKVNVDKLYMSA
VNHVFEKSMKPLLLEQHKRRQKHTSSKETFKVAKTIMGYIHCIQNPEWAAATAHKIAQEL
PPGTEKTQSLKFCLALGDAWLKDPKLEQEAARTKVETFLSKLKLQFQRSATENVLMSSQL
NSPEHLKLTGQPARLIVILYEHSSVEQRFRGPAGQTHPDIHAVCKEIAAINSVDFLKIRS
MLLEKWICKTGPAVAKDINNQDCVNDIQEDSDLMRVVYLLQIYSMDVGVCLLSPILSAET
WPLSSSGPRLTFCHRSRALLCLIHIADPTTLETRLHIPKTQVQYYLKCYIYLSQLEDLNI
PYTVESFLNSPKEGMVKGLWKNHSHEPQAVRLVADLSLEYQVFDPQLWNGLLQKLLGFNM
ISDLQKVLVALGAVPSLWQVSSFSRTWRSMILAPFVSASLPLSPQQQATLYRTFVLLLKC
PFLLNLDLIGIANRFAQFSLPGFALGALLLIPCAKRKGQQIQGLLSACNPITILEQLDEH
MNTGELAGVPSQIRDTVLMFICQNRQYQKLWKTKHFNLLKQHIVSSGDSNQVKNLVDYLI
SHSCEEDANSLAHEYLKHRERKGKLIPDMSPASSALKRFLSIDIDK
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacgacgttgaacttctaatcaatgaggataccaacacaggtcgcctttgcaat
gttcgagaggagaatagtggtctgtaccaagtggatactttggtcaaaattgcctcaact
gaaaaggtgttgtcagatcctcagctttactcctccagcagttcaaattgcagcattgtt
gttgctgattcaactgttatcctgtttgacctcagctatcagactatgttgctgcatctt
gactttgactctgatgtggatactgtggatgattgtctggacgggcattttctggtggtt
tgcgagagaaacggaaacctccatcttatctatgtgcctcaaaagagcactcttctcacc
atagctttgctgaagaatgtcccctctggaaaagagaaaacatatcgacatcttatccta
caggaggataagacatcttttgggatgtaccacctgttccttcttactcaagatggattt
tttcacatcacaaaccttgccctggagaagattcaaatagctattgagaaaatggacatt
ggggctttgaaagagctccagtctcgatttaagacagacttctgttccaccaaggagatc
catggagggggatgtaacacagcagtgatgtgcaaccttggcaatgaaatccacctcatg
attggggcggacggggaagctgttctaacccactggagattggatcatagtcagggcacg
atgtctctctgtcagtccctggactccagcctaataccaggggtgagaaagattctggtg
gtggacaatctcatgtatgttcttagcacagagaacattctgagtctttgggacctgcat
ttcctggtgatggtgtgctgctggcctgacctctccatccatgacttcctactcatcaca
gagtgtgactctgcttcaatagccacgcaagaaagtgccagcacaaaaatcattacattg
accatgcaagacaaaagccagatgaggagcctgcaggtgcgttctcttccctccatgact
gtcctctattctctggaggtctcctctacagcctgcctggtacagacaagaataagcacg
gacactatatatttgctagaggggatttatgagaattcacgaaactctgaggagcatata
tcctctgtcgtcatgagatgcttcacagaggctttgcctgagaacagactcagcagactt
ctctacaaacacaaatttgaggaggcagaaaagtttgccatagcatttgagcttgatgtt
gagcttgtctataaggtgaagctggattttgtgctggagcagctggcgtcagcctctgta
ggtggcaatgggcaggacgtatggtctgacctggtggaggaggcaaagaccaacctgatg
aagatcatggatgagcagtatgtggtggagtactgcctcaaggctccgtggccgaccttt
gacactgcagagaagatgctgaaccatgccgcctcccgctgcccctcctcacagatccag
gaggctctggctagactcgccaccttctgctgtctccacagcctggacaagttcaatgga
atctcctggattgagtttctgaacatcacagactacgttggggacatgctgtcccacttg
agagagggagacctgaagggggcccagcacctttggcttagacacgagggagagattgca
gtgcagtttgatgagagagttcttgatgctctgctcagctcctttccagaagaccttcca
tcccaggacctttgtctctggcttaggagtgtcattgtgccctttgttaggagagtggta
cctagaggacagaaaattgttgcgaggtggttggagcagagggccaggattctggagtta
acagaaaagggagactggccccagaatggactgaacttggcggaacttgggttgccgtcg
ttatggatgtggataccttctgaggatgactatggttcagaggaagtggagcacctcaag
tccctggtctctaacctccgccagctgctggacctctacaacaagtacaactgcaggctc
tccctgtcagtctttgagaaggcaagtgtccgcagcgtagcattcctcatgctggataag
gtgcctgccccagagctgatccctgccacggtggagggcagtgtcaggccctacagcctg
gagcaccagctgcccctggatgagctgctgcttcagtacatcaaggatctgctggaacgc
tgcagctcacagactactacgttgttcacagagtgggaggccaaagctgtggctgtgctt
ggctgcatcacggacactgacctggtggtagacgctgtgctggagatcatgcagaaggcc
gtggtgccctggactgaggtagtggagaggctggtccaacagcacttggagatggtggga
cccaagcaggagcttctgaaggaaagctaccgtctgatggagatgaggaagctgctcaga
ggctacgggatccgcaacttcaacctctccaacaacactcaaatcatgacactggtgagg
tacatcctcaagcaggacctccccacctccctggaggactctctgaagctggctggggcc
tacaaactccccacctcccagatacacatcttatacctcatccagctgattagccagagc
cagagcgagccatgtgtgacactcctgaaaaagatcgcccccgaggaggcggagtgtgtg
atcgagaggctggctaactgggcacgactggagttgcaggacaaagaccatgtgtctgag
gagcacaagaagcaccagatggtcgtagcacaagtgatggtggaggcactgacgttctta
cagcggatccagaaaggggatgcctttaaaagtgtggattgcgagaacaatctgatgatg
tttaaggcgattgctcacctacaggaggactttgacatcttcctcacccctaacaactat
gaggaccccaaggtgcgaaagcagttccaggagtatcacatcacagcctatgagaacacc
cgtgctcgaggtccctccaagagcaaggtcacagccacccccatggtggccaacgaccct
gacggcaagaccaagaacatttccactgaggctggcctccgccgcttggcacggcagctc
cagcgcacggagcaggagctgtgggctgacttggccctgcgtgccctgggggtcggcaag
gtcgacaaggccctcaagatcctcagtgagctgtataagcaccatggtaccaccagcaca
gggaaggtgcttttcagtgctgcccagaagctgtgccagatgctggaggcagacgtgccc
atgatcctccctgaaggcgtggacctcccagcagtcatccacaagctggcctgccaggcc
gtcactgtctgccactcagacctgctcctggactgtgtggagctgtgtaagagcacacgg
gctgccatggatgtctaccaccagtgtcagctgtcagacaactatggcttcatagctaag
gatttgtccctggcggctgaaagggacccgtactcccagtggagcttccaggatgtcttt
aaagaggactgcatcatcctggaccccgtgtctgtcctgccagtccagtatgagatcacc
aactgtctgctgcccttctcctcagatagaaagctttacccactggactgctcctgtctt
tctcactgctctttccaacaagatgccaacttcctgaacccgctactggtgcccctggcc
tccatgcatcagatgctgcaggagtgtagtcaattggagctggccctcagactgctggtc
aactcctttggcagctgtctgcagcacgtcacctccaacatcatgaacatcaagctcggc
attcagctctatggtccgcaggccctgcaaaaatatagggcgtgcttgagtgatttgaga
acaactactctgtcctctatcaatgctgttgcagttgccctcctgcacaaggtgtttaac
tggagagtggtggattgtgacctggctattggactctgcactctcctgtccaaaaccgag
gtgtttaagatactgtggaaggtgatcgacaacacttggcaaaactatgataagatcttg
gctgtggctatggtgggggcccatctctgtaacttgtacagcgagcaggaggagcggaag
aagtttctctcggtcatcaccgacgcagagtgggggatcgagctgggcaaattagggata
tccatccagtctgtgtttcgtcagtgtccggagatgaagagtaacctcatccctaccctg
gtgaagaacaagaacaccacccctgagattatcctccagtactgcagcacctttgatctg
aacagagacgaagtgataaaccagtacatcaccaccctgctgcaggaggaggggggaggg
gcagcagaccctggggcgggccagggggagcagccgctagggcatgcagacgccctggag
agagctctgcaggtcatccctatgctgcacagcaccagaaacctcaccatcagcctcagt
gctgccatactcaagctaagtccatataactacgagaggattgagggggtgctcaggatc
atacagacagctgatgagcagatcaccagcatctcaatcagtcaggcaataggtctgctc
cagcacctgaagtcctacaagcgcatctcttcccctacagacctggagagcagccacctt
ctggagaatggcctggaaccctcggccctggccaacatcagactgcccttccacctgctc
atgcagaccaccagctactggaagatcctctctccagagctcagtgaggagacctttcct
actctgcttctgattagcaagctgatgaaggtgaacgttgacaagctgtacatgtcagca
gtgaaccatgtgtttgagaagagtatgaagcccttactcctcgagcaacataagaggagg
caaaaacacacctccagcaaggagaccttcaaggtggctaagaccatcatggggtacatt
cactgcatccagaatccagaatgggccgctgccacagcccataaaatcgctcaggagctt
ccgccaggcactgagaagacccagtcattaaagttctgcctagctcttggtgacgcatgg
ctgaaggacccaaaacttgagcaggaggcagcgcggaccaaggtggagaccttcctgtcc
aagctgaagctgcagttccagcgctcggccacagagaacgtcctgatgtccagccagctg
aacagcccagagcacctaaagctgacagggcagcccgcccgcctcatcgtcatcctttac
gaacacagcagtgtagagcaacgcttcaggggccctgctggccaaacccaccctgacatt
cacgctgtatgcaaagaaatagcagccatcaatagtgtggattttctgaagatccgaagc
atgctgctggagaaatggatctgcaaaaccggcccagctgtagccaaggacatcaacaac
caggattgtgtcaatgacattcaggaggattcagatcttatgagggtggtgtacctactg
cagatctattccatggatgtgggagtctgtctgttgagccctatcctctcagcagaaaca
tggcccctcagcagttctgggccacgtcttactttctgccaccggagtcgggccctgctt
tgtctcatccacatcgctgaccccaccaccctggaaacacggctacacatccccaagaca
caagtccagtattacctgaagtgctacatctacctgtctcagctggaggacctaaacatc
ccttacacagtggagtcgttcctcaacagtcccaaagagggcatggtcaagggtctgtgg
aagaatcacagtcatgagccacaggctgtgcgtctggtggcagaccttagcctggagtac
caggtgtttgaccctcagctgtggaatgggttactgcagaaactactgggcttcaacatg
ataagcgacttgcaaaaggtattggtggcactgggagctgtcccctctctctggcaggtc
tccagtttttccaggacctggagaagtatgatcctggccccattcgtatcagcgtctctt
cctctgagcccccaacagcaggcaaccctctacaggacctttgttctcctccttaagtgc
cctttcctgttgaatctggacctgataggcatcgccaatcgctttgcccagttcagtctg
ccaggctttgccctaggtgccctcctgctcatcccctgtgccaagaggaagggacagcag
attcagggcctcctatcagcatgtaaccccatcaccatcctggagcaattggatgagcat
atgaacactggggagttggcaggggttccctcacagataagggacacagtcttgatgttc
atttgccaaaacaggcagtaccagaagctgtggaagaccaagcactttaatcttctcaag
caacacattgtgtcaagtggtgactccaaccaggtgaagaacctggtagattatttgatc
tcccacagctgtgaggaggatgccaactccctggcccatgagtatctgaaacacagggag
cgtaaagggaaactaataccagacatgtcccctgcatccagtgccctgaagaggtttctc
agcatcgatatagataagtaa
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integrated database retrieval system
