Oncorhynchus tshawytscha (Chinook salmon): 112262891
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Entry
112262891 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 25
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262891
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112262891
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_10
PH
IQ_SEC7_PH
SH3-RhoG_link
PH_19
Motif
Other DBs
NCBI-GeneID:
112262891
NCBI-ProteinID:
XP_042152957
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All DBs
Position
LG02:complement(33042933..33105088)
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AA seq
667 aa
AA seq
DB search
MKGGHHQRGCGCQHLFRKVLAMCGCCYARVRESYSAAGSEGSITPSVGSIAPQASGSSRP
CSPSSPGESRHSVSALKKWLTMPVCKLSVGGGDGKGVRQVHRLDGKQPSTHLPLGQALGR
PLEQGENYTILPCTDGDLGWNDGLVSPAAYSPAHTLCHSYLSDLLQNRDTHSLNHQSSTI
LLEEEDGSSLIDDSTSQWSATMDSEEDRRSALEKSIYVLTELIETEKMYVDDLGFIVEGY
MASMASQGIPEDMKGKDKIVFGNIHQIYDWHKDYLLGELEKCVAEPNRLAQLFIKHERRL
HMYVVYCQNKPKSEHIVSEYIETYFEELRQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFL
KYYTKAGRDTSELERAVEVMCFVPKRCNDMMNVGRLQGFEGKITAQGKLLQQDTFTVSEQ
DSSFLSRAKERRVFLFEQLVIISEPIDRKKGFSLPGYTFKNSIKLSCLGVEDHCEEDPCR
LVLTSRGSDGSVARFVLQASSQETRRAWVNDVVQILETQRNFLNALQSPIEYQRKESKSN
SLRGAMNAPVAPTSGLRPHSSASIDRHRLPNLRSYNTSLPSLHLPSQPPADTQSPLYLSP
ATPRPSHLPLTSPQQLSNGLRHPGQHSLQGGTDRYHGPMPGEGGDYAPNHSGNHDQLTDL
SLHEHEC
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggggtcaccatcagcgggggtgcggatgtcaacacttgttccgaaaagtgctg
gccatgtgtggctgctgctatgcccgtgtccgagagtcatactcggcggcgggcagtgag
ggcagcattaccccatccgtaggctccatagccccccaggcctcgggcagctccagaccc
tgctctccctcctccccaggggaatcgcggcactctgtcagtgccctgaagaaatggctc
accatgcccgtctgcaagctgagtgtgggaggaggggatgggaagggggtcaggcaggtc
cacaggctggatgggaagcaaccctctacccatctacctctcggccaggccctaggaagg
cctctggaacagggagagaactacaccatcctcccctgcactgatggagacctggggtgg
aacgatggtctggtgagtccagcagcgtactctccagcacacaccctctgccatagctac
ctatctgacctgctgcagaacagggacacacatagtctgaaccatcaatcttccaccatt
ctcttggaagaagaagatggctcctccctgattgatgactcaaccagccaatggtcagcc
acaatggacagtgaagaggacaggaggagtgccttagagaagagcatatatgtgctgaca
gagctgatagagacagagaagatgtatgttgacgacctgggattcatagtggagggctac
atggccagcatggccagtcaggggatcccagaagacatgaagggcaaagacaagatagtg
ttcgggaacattcaccagatctatgactggcataaagactatcttctgggggagctggag
aagtgtgtggctgagcccaacagactggcccaactcttcatcaagcatgagcggcgtctc
cacatgtacgtagtgtactgtcagaacaagcccaagtcagagcacattgtctcagagtat
atcgagacctattttgaggagctgaggcagcagctgggccacagactacaactcaacgac
ctgcttatcaaaccagtacagaggatcatgaaataccaactactgctcaaggacttcctg
aagtactacaccaaagcaggaagggatacctcagagctggagagagcggtggaggtgatg
tgttttgtgcccaagcgatgtaatgacatgatgaacgtgggcagactgcagggctttgag
gggaagatcacagcccaggggaaactgctccagcaggacacctttacagttagtgagcag
gacagcagcttcctgtcccgtgccaaagagaggcgggtcttcctgtttgaacagctggtc
attatcagtgaaccaatcgataggaagaagggcttctctctgccagggtacacctttaaa
aacagcatcaagctcagttgtctgggtgtggaggaccactgtgaggaggacccatgtcgt
ctggtcctgacgtcccgcgggtctgatgggagcgtggcacgcttcgttctgcaggcctcg
tcccaggagactcggagggcctgggtcaacgacgttgtccagatcctggagacccagagg
aacttcctcaacgctctccagtctcctatagagtaccagcgcaaggagagtaagtccaac
agcctgagaggagccatgaatgctcccgttgcaccgacctctggcctgcgaccccactcc
tctgcctccattgaccgccaccggctacccaacctgcgttcttacaatacctccctgccc
tccctccacctgcccagccagccccctgcagacacacagtccccgctgtatcttagccct
gcgacaccccgtccctcccatctccctctgaccagccctcaacagctcagcaatggcctg
cgccaccctggccagcacagcttgcaggggggtactgacagataccatggacccatgccg
ggggagggaggagattatgcaccaaatcactctggcaaccatgatcagctgacagatctc
tctctgcatgagcatgagtgctga
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