Oncorhynchus tshawytscha (Chinook salmon): 112262905
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Entry
112262905 CDS
T05605
Name
(RefSeq) transcription factor 7-like 1-B isoform X1
KO
K04490
transcription factor 7-like 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
otw04520
Adherens junction
otw04916
Melanogenesis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112262905
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112262905
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112262905
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112262905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112262905
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
112262905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112262905
NCBI-ProteinID:
XP_024294511
LinkDB
All DBs
Position
LG12:complement(29816487..29865888)
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AA seq
579 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENVSAERDLDDLKSSLVNESENNSSSSD
SEQAERRPQPRPDLDSYEKTRDYFSEAFRRQQDGGFFKSPHYPGYPIFMIPDLTNPYLSN
GALSPSARTYLQMKWPLLDVPGAAGLKDSRSPTPGHLSNKVPVVQHAHHVHPLTPLITYS
NEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQ
HMYSIPPGGFRHPYPTLAMNASMSSLVSSRFSPHMMPHHPHGMHQTGIPHPAIVSPAIKQ
EPNTHDHMSPSMHSRKSPGPVKKEEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAA
INQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRDNKPDSTP
EDFSISNKKQCVQYLPSEKMCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQAQPLS
LTTKPEGRLHHHFLTGKPSGSASSSSSSSSSSSSSHPSISIPIGTSGSHSTPILPRPIPF
SSLHHSMLSPPSPFHQAALHSHHALFQSQPLSLVTKSSD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacttaacggaggcggcggcgatgatttaggggcgaatgatgaaatgatatca
ttcaaagatgaaggggagcaagaggaaaaaatatccgaaaatgtatcagccgagagggat
ttggatgatctgaagtcttctttagtaaacgaatcggaaaacaacagtagctcatcagac
tccgagcaagcagagaggcgccctcaaccaagaccagacttagacagttacgagaaaacc
agggattactttagtgaagcattcagaagacagcaagatggtggctttttcaagagtccc
cattatcctgggtacccaattttcatgatcccagatcttaccaacccctacctatccaat
ggggccctgtcccctagcgcaagaacgtacctgcagatgaaatggcctctactggatgtc
cctggagctgctggactcaaagactcccgctcccccaccccaggacacctatccaacaag
gtcccagtggtgcagcatgctcaccacgtccacccgctgacccccctcatcacctacagc
aatgaacatttctcccccggaacccctccctcacacctctccccggagatccttgaccca
aagaccggcattcctcggactccccatccatcagagctctctccgtactaccccctgtct
ccaggtgctgtgggacagatccctcaccctctaggatggctggtgccacagcagggccag
cacatgtactctatccccccggggggattccggcacccctatcccaccctcgcaatgaat
gcatctatgtccagcttggtgtccagccgtttctccccccacatgatgccccaccacccc
cacggcatgcaccagactggtatccctcatcctgctatcgtatcaccagccatcaagcag
gaaccaaacactcatgaccacatgagcccctctatgcattccagaaagtctcccggcccg
gtgaagaaggaggaggacaaaaagccccacatcaagaagcctctgaatgccttcatgctg
tacatgaaggagatgagggccaaggtggtggctgagtgcaccctgaaggagagcgctgcc
atcaaccagatactgggccgaaggtggcactcactatcgagagaagagcaagccaaatac
tatgagctggcaaggaaagagaggcaactccactcccaactctacccaggctggtcagca
cgagataactatggaaagcggaaaaagaggaagagagataataagccagactcaacaccg
gaggacttctcaatcagtaacaagaagcagtgtgtacaatacctgccctcagagaaaatg
tgtgacagccctgcctcgtctcacggcagcatgctggattctccagccacaccctctgca
gctctggcctccccggctgctcccgccgccacacactcagagcaggcccagcccttgtcc
ctcaccaccaaaccagaaggacgcctgcaccaccattttctaactggcaaaccttctgga
tctgcttcatcttcgtcatcttcatcctcttcctcctcctcttcccacccaagcatctcc
atccctattggtacttcaggcagccactccacacccattctccctcggccaatccccttc
agctccctgcaccactcaatgctctcaccgccctctcctttccatcaagcggccctacat
tcccatcatgccctcttccagtcacagcccctctcgttggtaaccaaatcgtctgactaa
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