Oncorhynchus tshawytscha (Chinook salmon): 112262920
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Entry
112262920 CDS
T05605
Symbol
rab11fip1a
Name
(RefSeq) uncharacterized protein rab11fip1a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112262920 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262920 (rab11fip1a)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112262920 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
112262920
NCBI-ProteinID:
XP_024294543
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All DBs
Position
LG12:30271477..30288626
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AA seq
721 aa
AA seq
DB search
MFSNLHSSLAPAKVRRSPSKYPYSSTENLAAIGSSPNGSDKKRRDPLSPSPMEPQSHGKS
NAGFRIVSAKSAVASGDPVPIKAVEGKIPPLPLPDYDSLFPQKRHGVQGQTRWDHIIAEV
NQRQQEYVPQLIGKEMSVDGPDLDSPGPPHNDKYSYLQERAAEHIHQKRTQVQKVQSNSL
RSIGPSSLPALTPPSKPVAAVPLRLVVDSNTNQDQSTIQANPPEAPNAFVSKVLVSTKPM
VQKRDLPSVTPREDAKVINTSFATASDGKPVFSTEKHRPTSRVVLVSSSTDEPKGLPNTP
KEIPAAKPRQRLVRKEPLRPPNHEQTLAGSTTVEQDRRASTLDIMRRSSPVTAKNTEVTA
YNEKQLLFDSAESNIDKKTQLEHIMKAKFAELDPFPIADILPKDPWAHPEPSHSGDYLFT
GEPQRNRKLKEQAMTTDDLDKLFVPNNATDPFDSFNDGDSDEPQEQEKTEEHSPAFQRGF
SQIKKKQGAPQPSANSSNKAVIGKIELVKQNPSPREDKLIISAATTGCVKLSPQNTRQSK
LYCRDGVESQDKWAADPFTSSSHVPSVLTSEPPQSVGGELTSQAGEKTLLRTCVSPSEVQ
PLTVLSSNGGGQASTPRRPHPVKPMSSIESQAPISTPVVGEMLTYDRTLGKMKVPGMVES
GPYTQLTQEELITLVVKQQMELSKKDSKIVELEEYIDNLLVRVIEEKPSILLGLNSVKQA
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaacctccactcctcgcttgctcccgctaaggtgcggaggagcccctccaag
tatccctacagcagcactgagaacctggctgccataggatcttcccccaatggatctgac
aagaagcggcgagatcctctgtcccccagcccaatggaaccgcaaagccatggaaaatcc
aatgcaggcttcagaattgtctctgccaaatctgctgttgcaagtggtgatcctgtgcca
attaaggcggttgagggcaaaatacctcctctacctcttcctgactacgatagcctgttc
ccacagaagagacatggagtacaagggcagactcgatgggaccatataattgcagaggtg
aatcagagacagcaagaatatgtgcctcagctcattggtaaagagatgagtgtggatggc
ccagacctcgactcaccaggacctccacacaatgataaatattcctacttgcaggagcgg
gcagcagagcacatacaccagaaacggacacaagttcagaaagttcaatctaactctttg
aggagcatagggcccagcagtttgccagcactcactcccccttccaaaccagtagctgca
gtcccccttagactagtggtagactctaacacaaaccaagaccagagcactatacaggct
aatccacctgaggcgcccaatgcctttgtctccaaagtcttggtctctacaaaacccatg
gttcagaaaagagacttaccctccgtgacacctcgggaggatgcaaaggtgataaacaca
tcttttgctacagccagtgatggcaaacctgttttctcaacagaaaaacatagacctaca
tcacgagtggttttggtgtcaagttctacagatgaacctaaaggactgccaaacactccc
aaagagatccccgcagccaaacccagacaaaggttagtccgcaaagagccattgagacct
ccaaatcatgagcagacattagcagggtctaccactgtagagcaggacaggagagcctca
accctcgatatcatgagaaggagtagtccagtgactgcaaagaacactgaggtgactgct
tacaatgaaaagcaactcttgtttgactctgcagaaagcaacattgataaaaaaacacag
ttggaacacattatgaaagcgaagtttgctgaacttgaccccttccccattgccgatatc
ctgcctaaagacccatgggcccacccagagccaagccacagtggagattacttgttcact
ggagaaccacagagaaaccgcaagcttaaagaacaggcaatgacaactgatgacttggat
aaacttttcgtgccaaacaatgcaacggatccctttgacagttttaatgatggtgactcg
gatgaacctcaagagcaggaaaaaacggaggaacacagtcctgcttttcaaaggggattt
tcccaaattaaaaagaaacaaggagcaccccagccttcagctaattcaagtaataaagca
gtgattggaaaaattgagctagttaaacaaaacccttcacccagagaagacaagctgatc
atctcagctgctacaacaggatgtgtaaaactgtcgcctcaaaatactagacaaagtaaa
ctctattgcagagatggggtggaatctcaagacaagtgggcagcagacccttttacttcc
tcctcccatgtaccttctgtcctgacttctgagcccccccagtccgtagggggagagctt
acctcacaggccggggaaaagaccctgctacggacctgtgtctcaccctctgaggtgcag
ccactcactgtgctgagtagcaatggtggtgggcaagcctcaactccacgcaggcctcac
ccggtgaagcccatgagctccatagagagccaagctcccattagcaccccggtagttgga
gagatgttgacttatgaccgcaccctggggaagatgaaggtgccaggcatggtggagagt
gggccctacacccagctgacccaggaggagttgattaccctagtggtgaagcagcagatg
gagctctccaagaaagactcaaagatcgttgagctagaggagtacatagacaacctgctg
gtgcgtgtaatcgaggagaagcccagcatcctgctgggcctcaactctgtcaagcaggcc
ctgtaa
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