Oncorhynchus tshawytscha (Chinook salmon): 112262941
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Entry
112262941 CDS
T05605
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262941 (lgi3)
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
112262941 (lgi3)
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_1
LRRCT
LRR_9
Motif
Other DBs
NCBI-GeneID:
112262941
NCBI-ProteinID:
XP_024294593
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All DBs
Position
LG12:complement(31210269..31220613)
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AA seq
550 aa
AA seq
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MLNAGSRRVPGWLKLLSSLCLLLCLVGETGAKRVPKIPRCPTTCSCTKDSAFCVDTKTIP
KSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADDAFAGLSHLQYLFI
ENNDIQALSKHTFRGLKSLTHLSLSNNNLQLLPRELFKYFDILTDLDLRGNSFRCDCKIK
WLVDWMEKSNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFQSVSVESY
EFNDDQFVAFAQPDTGFCTLFVWDHVEMVFRMYHNITSRSAVYCKPVVINNTLYMVVAQL
FGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVADSSKAGSTSIYRW
NSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNRSLRQFAFHSQITE
TADVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQRYVEIQTLPSRGSMAVYPFIVGPRQ
YLLLGSDFSFSRVYLWDDLTQRFQLFQELNMRAPRAFSLVSVDNKDILLAASFKGNTLAY
QHLIVDLSAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgccggatcgagaagggtcccgggatggctgaagctgttgtccagcctatgt
ctgcttctctgcctggtgggggagactggggccaagagggtccccaaaatcccccgctgt
cctaccacctgctcctgcaccaaagacagtgccttctgtgtggataccaagactatcccc
aagagctttccccctgggatcatctccctgacgatggtgaatgcagccttcactacaatc
ccagagggagccttctcccacctgcaccttctgcagtttcttctgctgaactctaacacc
ttcactgttgtggctgatgatgccttcgcaggtctgtcacacctgcagtacttatttata
gagaacaatgacatccaagccctgtcaaagcacaccttcagagggcttaaatccttgact
cacctttctctgtcaaataataacctgcagctccttccacgagaactcttcaaatatttt
gacattctgacagacttagacctgcggggtaactcattccgctgtgactgtaaaatcaag
tggcttgtggactggatggagaagtccaacacctctgtccctgccatctactgtgccagc
ccatttgagttccaaggccgcagaatccatgatctaaccccacgagacttcaactgtatc
agcgcagactttgcagtttatgaaactttccccttccagtctgtgtcagtggagtcctat
gaattcaacgacgatcagtttgtggccttcgcccagcctgatactgggttctgtacactg
tttgtatgggatcatgtggaaatggtcttccggatgtaccataatataacatctcgctcc
gctgtctactgcaagcctgtggtaataaacaacactctttacatggttgtggctcaactt
tttggaggatcccacatctacaagtgggaagaggacccacagcgatttgtgaagattcag
gacattgacaccacacgtgtgaggaaacccaactttgttgagaccttccagctggatgat
gagtggtactttgcagtagcagacagttccaaggcaggctctacgagcatataccgctgg
aacagcaacggtttctactcccaccaatcccttcatccctggcatcgtgacacccatgtg
gagttcctagatgtggaggggaagcagcgtctcattctctccagtgcctcccagccccca
gtggtttaccagtggaaccgcagcctgcgccagtttgcctttcattcccaaatcactgag
actgctgacgtacagatggtcaagcatttctgggtgcgcaaagttctctacctctgcctt
acacgcttcattggcgactccaagattctccgctgggaggggcagcgctatgttgagatt
cagaccctgccctcacgtggctccatggctgtgtatccattcatcgtgggcccccgccag
tatctcctcttagggagtgatttctccttctctcgagtttacttgtgggacgaccttacc
cagcgcttccagctcttccaggagctcaacatgagagcaccccgggccttcagcttggtg
tcagtggacaacaaagacatcctgctggcagccagcttcaaaggcaacaccctggcctac
cagcacctaatagtggatcttagtgccaaatag
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