Oncorhynchus tshawytscha (Chinook salmon): 112262962
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Entry
112262962 CDS
T05605
Name
(RefSeq) protein turtle homolog A-like isoform X1
KO
K22655
immunoglobulin superfamily member 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112262962
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Other
112262962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_SEMA-3_4_7A
Ig_4
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_5
DUF6338
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
112262962
NCBI-ProteinID:
XP_024294632
LinkDB
All DBs
Position
LG12:31881113..31922666
Genome browser
AA seq
2096 aa
AA seq
DB search
MGLERLWLLGVTTAVALCLLRTSQGVEAVVRARVGGTAELSCSLTPPTTGATTPNLFPLH
VVEWVRLGYNVPILIKFGVYAPRVHPNYKGRVSLTRGASLLVEGLSLEDEGWFECRILLL
DRTTDEFRNGTWTFLSITAPPVFIKTPPTFVEVLQGDSLALSCGAHGNPRPTVIWHKDET
PIEKHEKMAVLNGTLSLVTVTRETSGMYKCQVSNSEGNLTHTTQLQVKGPPLIIIAPEDT
TLNISQDAVLQCQAEAYPSNLTYEWWKQGQNVYHIEYLKTRVKILVDGTLLIPSLVPEDT
GNYTCIPTNGLMTSPSASAHLKVKHPARVGRMPRETYLPTGMGGVIFCPVQAEPPMIFVN
WTKDGNNLNLDNFPGWLVNAEGSVFIATANDNAVGMYTCTAYNSYGTMGQSEPTKVILQD
PPSFSVSPRAEYLQEVGGELVIPCEADGNPSPNITWSKVGPIPRSPYTVLSNGSLLLKPL
SKDHQGGWECLATNRVATVGTATVVLVLGTSPHAASSVSVSTGMNQANVSWEPGFDGGYT
QKFTVWVKQTSRGKHEWGSISVPTSKSHLLVTGLLAGTSYQFSVLSQNKLGSGPFSEITS
VRTQALPTYPPTVVTSLPTLNPPLFLSANRTLLGIVLQWYPPESQATLLTGYVLQARRDR
GQWVILNSAVKTNQSELLVQGLLRDCIYDLRLMSRSNKLLSEPSESVNVNTTGMEMYPVQ
PGFLEFVPEPLLAGVLGGVCFLFVAIILSLVTACVMSHRRAHRRRKRRDDQPSAFQKTLS
PEARSPSDSPDSILKIKFCPPLSFFPNSSSSQADRSSFNKGSRGEYQDQRRQLLSSSTPP
PHYTLFESHLGGKAPSPSALESILRGPDGRFIVQPLPEAPTFSNMKTVFLQTQTNRGGSG
TGSNRTSFRDSPKSSSLSSERGEGKDSPLTVEVTELSKPPASPGRVRAMARNFSRHGCFY
SDDEQGFSEALLERASFHSDRSEKRVCDSLKRYRSGHPEDIFPSLGRTARLLEMDRHHLA
DYQPMERESQLTNASILVSQIDTSEQKQDNLRKCRQLAKEREMMERELDNYTASQREREW
EKEENQLEKATSPNRELGSSGAEDPIWKPQDITLRPKAHRASGQTHQLSDYRRACYFGNT
SSPMDRLPSSYIQWDISPVTSISSLVPVQSPLESTTPRSQHPHQHHAGLSMEDSLHVDCS
RCPVTQCTSPSQLSPTSEIPPISQGTDRNVGRARSRSPDRTVEREQDMYRRRSMVEGGWR
ETKQPGGGDLKPRSSFAYGTQHLEPTAERSVSAERVRATGSGQPYPGTAPYSLSERTETM
DDRERLNQIPSGCSTLPYGYSTLLHKAGAKGKVRGDQIRDDPQSSLSNPEQEREGVRARS
RRSDRALFSDSPSQISPLTLLEACESDQSQFSAARITESFKNKPATQAPKMSPLQTSAIL
EYLSLPGFIEMSVDNPGDESELTDTACKSVEPQTDTSLEGKPDVVPKNWDVHVQEKLEKS
SSQNTVSFLENRHFVGPAGTSKATEKPDYRYSLQVQARDSSHSAAIPDRSKKLAPGSEYM
GNYRYYEQSQPLISQKTTGSERPPTRIGLSPAQTLASAAKSMAEVVFKHTNTFAGKPESA
SEQFQRLHSQGNRTNKIASRIYQHPAPFIKKSLSIGPCRTLSGMGQPRPFIKKSISLGSQ
KLEHFERPRTYVSEKCYWDEFPNPDVRVKSYSLGRTPASSFSRPDPSWREGVQFRQPSVG
SLEKPLNADRSLERLQYDRSLASSSYTYLSPSMYPPRQPPVSVRLDLSDPCRQASAYPDA
ATSPITYQDALRSVEQRYVSMNSSIPQYLTRPDQYLPRLDQYPPRPDQYTPRPGMRGDYP
RPMESKRGQPRPNLPRMYSWPSPYHGGPFPARDVDSHREAERGTGKGAGAEAEMSDNREG
WRASYASQSSGRGSVGLLRQSLSITPILLSSPETTEESETQRHRAEMDLREWRKKRRNTS
VDESYEWDSADVCVDLEVLEAMKPQAGVGKGRGQGRHDRVLSVAGLQDLYRKGPPPSVSP
PVSNLPHCQYTRSLSEARFNALRLEYQEYRRSQGSSCTCDPCLPPDTDSDSNSALL
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgggattggagaggctgtggcttctgggtgtcaccactgctgttgccctctgtctgctg
cgtacatcccagggtgtggaggcggtggtacgagccagggttggggggactgcagagctc
agttgcagtcttaccccccctactacaggagccaccaccccaaacctgttcccactgcac
gtggtggagtgggttcgcctgggttacaatgtgcccatcctcatcaaattcggagtgtac
gcaccacgcgtgcatcccaactacaagggccgtgtgtctctgacccggggggcctcgctg
cttgtggaggggctgagcctggaggacgagggctggttcgagtgtcgcatcctactcctg
gaccgcaccacagacgagttccgcaacggcacctggacctttctctccatcacagcccca
cctgtgtttatcaagactccgcctacctttgtagaagtcttgcaaggggattccctggcc
ctcagctgtggtgctcatggcaatcctcgaccaactgttatctggcataaagatgagacc
ccaattgagaaacatgaaaagatggcggtgctcaatggcaccttgtctttggtcaccgtc
accagagagacatcaggaatgtataaatgtcaggtgtccaactcggaagggaatctgacc
catactacccagctgcaggtcaaaggtcctccactcatcattatcgccccagaggacacc
accctcaacatatcccaggatgcagttctacagtgccaagctgaggcctatccctccaac
ctcacctatgagtggtggaaacagggacagaatgtctaccatatagagtatcttaagaca
cgtgtgaagatcctagtggacggcacactcctcatccctagtcttgtcccagaggacact
gggaattacacctgtataccaaccaacgggctgatgacctcaccctctgcctcagcacac
ctcaaagtcaaacaccctgccagggtgggccggatgcccagggagacgtatctacctacg
ggcatgggaggagtcatcttctgcccagtccaggctgagccccccatgatctttgtcaac
tggaccaaagatgggaacaatttaaaccttgacaatttccctggctggttggtgaacgcc
gagggctctgtgtttatagccacagctaatgacaatgcagtgggtatgtacacctgtact
gcctataacagctacgggaccatgggacagtctgaacccactaaggttatcctgcaggac
ccaccctcattctcggtgtcccctcgtgctgagtacctgcaggaggtgggcggggagctg
gtcatcccctgtgaagctgatggaaacccctctcccaatatcacctggagcaaggttggt
cccattcctcgctccccgtacactgttctgtccaatggctccctcctcttgaagcctctc
agcaaagatcatcaggggggctgggagtgccttgccaccaaccgtgtggccaccgtcggc
actgccactgtggtcttggtgctgggcaccagccctcatgctgcctcatctgtatcagtc
agtactgggatgaaccaggccaatgtgtcctgggaacctggctttgatggaggatacacc
cagaagtttactgtctgggtcaagcagacctccagagggaaacatgagtggggatctatc
tccgtgcccacttccaagtctcacttgttggtgacagggctgctggctggcaccagctac
cagttcagtgtcctttctcagaacaaactgggctctggacccttcagtgaaattacctct
gtcaggacgcaggccctgccaacatatccaccgacagtggtgaccagtctaccaactctc
aaccctcccttgttcctgtcagccaatcggacattgctggggattgtcctgcagtggtat
cctcctgagtctcaggccacactactcactgggtatgtcctccaggctcggagggacaga
ggccaatgggtcattctcaacagtgctgtgaagaccaaccagagtgaactactggtgcaa
ggattactgagggactgcatttatgatctgagattgatgtctcgcagtaacaaactactg
agtgagcccagcgagtctgtcaatgtgaacaccacagggatggagatgtaccctgtccag
ccaggcttcttggagtttgtccctgagcccctattggctggtgtgttgggtggagtgtgc
ttcctgttcgtggcaatcatcctctccttggtgacagcctgtgttatgagtcacagaaga
gcccatcggcgcaggaagaggagagatgatcaaccctctgccttccagaagactctttct
ccagaagctcgctcgccttctgacagccccgacagcatcctgaagatcaagttttgtcct
cccctgtctttcttccccaactcctcgtcttcccaggctgatcgttcctccttcaataaa
ggcagccgtggagagtaccaggaccagcgcaggcagctcctgtccagctctactccccca
ccacattacaccctctttgagagccacctgggaggtaaggccccctcgccctctgctctg
gagtccatcttaagaggcccagatggacgttttattgtccaacccctgccagaggcgcct
actttttctaacatgaagacagtcttcctacaaacccaaaccaataggggaggcagcggc
acagggagcaaccggacatctttcagagactctccgaagtccagcagtctgagctctgag
aggggagagggaaaggactcccccctgacagtggaggttacagaactcagcaagccccct
gcctccccaggcagagtgagggcaatggccaggaacttctcccgtcacggctgcttttac
tctgatgacgagcagggcttctcagaggctctgctggagagagccagtttccactccgat
aggagtgagaagagagtctgtgactccctgaaaagataccgatctgggcacccagaggac
atcttccccagcctgggcaggacagccagactgctggagatggacaggcatcacctagca
gattaccaacccatggagagagagagccagctgactaacgccagcatactggtctcacag
attgacacaagtgaacaaaagcaggataacctcagaaagtgtcggcagctggccaaagag
agggagatgatggaaagggagctggataactatactgccagccagagggaaagggagtgg
gagaaagaggagaaccagcttgaaaaggcaacaagccctaacagagaactgggcagttca
ggggctgaggatcctatatggaagccacaggacattaccttacgtcccaaagcccaccgg
gcgtccgggcagacccatcagctgtcggactataggagggcctgctactttgggaacacc
agcagcccaatggaccggctcccttcctcctacatccaatgggacatcagcccagtcacc
tccatcagcagccttgttccagtgcagagccccttagagagcaccacgccaagatcccaa
catcctcaccaacatcatgctgggctgtccatggaggactcactacatgtggactgctca
cgctgcccagtcactcaatgcacctctccatctcagctctcccctacctcagaaatacca
cctatcagtcaaggaacagacagaaacgtaggcagagccaggtcaaggagtcctgacaga
actgtagaaagagagcaggacatgtatcgtagaaggtctatggttgaggggggctggagg
gagacaaaacagccagggggaggtgacttaaaaccaagatcgtcctttgcttatggtaca
cagcatctggagccaacagctgaaagatctgtttcagcagagcgagtgagggccacaggt
tctggccagccatacccaggcactgcaccatatagtctgtctgagagaacagagacaatg
gatgatagggagagattaaatcaaattccctctggttgctctaccttgccatatggttac
tctaccttgctccacaaagcaggggccaaagggaaagtgagaggtgatcaaattagggat
gaccctcagagttcactgtcaaaccctgagcaggagagagagggtgtcagggcacgctcc
agaaggagtgatagggctctttttagtgacagccccagtcaaatttcccccttaactctt
ctggaagcgtgtgagagcgatcagtcccagttctctgctgctagaataacagagtctttc
aagaataagccggcaacccaggcacccaaaatgtccccactgcaaacaagtgcaattctg
gagtatttgagcctcccgggtttcattgagatgagtgtggacaaccctggggatgaatct
gaactcacagacactgcttgcaaaagcgtagagccacagacagacacttctctggaaggt
aagccagacgtggttccaaaaaactgggatgttcatgtgcaggagaagctagagaaaagt
tcaagccaaaacacggtttcttttttagaaaacagacactttgttggtccagcaggaact
tcaaaggcaactgagaagccagactatagatactctctgcaagtgcaagcaagagattca
agccacagcgctgcgattccagacaggtccaaaaaactagcacctgggtcagaatacatg
gggaattatcgttattatgagcagtcacaaccacttattagtcaaaagacaacaggctca
gagagaccaccaacgagaattggtttaagtccagcccagacattggctagtgcagctaaa
agcatggcagaagttgtgtttaaacacactaatacttttgcagggaaaccagagtcagct
tcagaacaattccaaagacttcattctcagggcaacaggactaataaaatagcctctagg
atctatcaacaccctgcaccgttcatcaagaaatctctgagcattgggccctgcagaact
ctttcaggcatgggacagcctcgtccattcataaaaaagtccatcagcttagggtcacag
aaattggagcattttgaaagaccaaggacttatgtctcagagaaatgttactgggatgag
ttcccaaacccagacgtccgggtcaaatcgtatagtttaggacgcacccctgcatcctcc
ttttccagaccagacccctcgtggcgggaaggggtccagtttagacagccgagtgtagga
agcttggagaagcctctgaatgctgacagatccttggagaggcttcagtatgacagatcc
ctagccagctcttcctatacctacctcagcccctccatgtacccaccaagacaaccccca
gtctctgttagactagacttatcagatccgtgtagacaggccagtgcttatcctgatgcc
gccacgtcgcctatcacatatcaggatgctctgaggtctgtagagcaaagatatgtctct
atgaactcctcaataccccagtacctaactagaccagaccagtacctacccagactagac
cagtacccacccagaccagaccagtacacacccagaccaggcatgaggggagactacccc
agaccgatggagtccaagaggggccaaccgaggcccaacctgccccggatgtatagctgg
ccttcaccctaccatggtggccctttcccagccagggatgtagacagtcatagagaggca
gagagagggacagggaagggggcaggagctgaggcagagatgagcgacaacagggaagga
tggagggccagttatgccagtcagagcagtgggagaggtagcgttggcctcctccgtcag
tccctctctatcactcccatccttctcagctccccggagacaacagaggaaagtgagaca
cagagacacagagctgagatggatctacgtgagtggagaaaaaaaagaaggaacacatca
gtagatgagagttatgagtgggattctgctgatgtctgtgtggatttggaagtcctggag
gccatgaagccacaggcgggggtaggaaagggcagggggcagggcaggcatgatcgagtc
ctttctgtggctggccttcaggacctctacaggaaaggccctcctccctcagtcagtcca
ccagtttccaacctacctcactgccaatacacccgctccctaagtgaggcgcgcttcaat
gcactccgcctggagtaccaggagtacaggcgctctcagggatcctcctgcacctgtgat
ccctgcctccctcccgacacagactctgactccaactcagcactgctctaa
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