Oncorhynchus tshawytscha (Chinook salmon): 112262970
Help
Entry
112262970 CDS
T05605
Name
(RefSeq) synapsin-1 isoform X1
KO
K19941
synapsin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262970
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112262970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
Motif
Other DBs
NCBI-GeneID:
112262970
NCBI-ProteinID:
XP_024294642
LinkDB
All DBs
Position
LG12:31996330..32014507
Genome browser
AA seq
684 aa
AA seq
DB search
MNYLRRRLSDSNFMSNLPNGYMTDLQRPDPPQQDPAIVSPGPPERRMSTNQQSEGTGSGA
GAGFLSSFTKAVKQTTAAVAEKVTEVADKAGVASGAKILLVIDDQQTDWVKVFKGKKVHG
EFDIKVEQADFSEINLIAHATGAYSVDIEAIRNETKVTKCFRPDFVLVRQHAFSMAKNGD
HRHIVIGLQYAGLPGVNSLHSVYNFCDKPWVFANMVRLYKQLGPEEFPLIEQVYYPNHRE
MITTPGFPVVVKMGHAHSGMGKVKVDNQYDFQDIASVVALTKTYATSEPFIDAKYDVRIQ
KIGDNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYRMWVDSCSEVFGGLDMCAVEALHG
KDGKDYIIEVVGCSMPLIGDQQDEDRAQIAELVVSKMNQTVPHIASPSPVRPTAAQPAQK
AASPQPISQPKVPQAQQRPPPQGGPQQAPTSSTAPRQGSPSQQRPSPQGQSPAQSSNTQN
PSAQAPQQARQASPGAGAQQRPPGQGQKPSSGQGSPQRSMSQGGSPQSQRAQQSGPQQQQ
RPPPGGPGQKPTGGQPQQRPQQKPGQPARQQSQGGGPQVPQQQRAPAQQGRPGAPTTQQP
RPSAQGQGGPGGKPPLQQKPQPPLKPSHDHPAMGATPPLNKSQSLTNAFNIPETPAPQAS
LSQDEVKAETIRNLRKSFASLFSD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaattacctgcgtcgtcggctgtcggacagcaattttatgtccaatttgcccaatggg
tacatgactgacctacaacgccctgacccgcctcagcaagaccctgcaatagtgtcgcct
ggaccaccagagaggcgtatgtctaccaaccagcaatctgagggcactggaagcggagcc
ggagctggctttttatcctcctttactaaagctgtcaaacaaaccactgccgctgtcgct
gagaaagtcaccgaggtagcagacaaagcaggcgttgcctctggtgccaagatactcctg
gttattgatgaccaacagacagactgggtaaaggtcttcaaaggtaaaaaggttcatggt
gaattcgacattaaggtggaacaggctgacttctctgaaatcaacttgatagctcatgct
acgggggcctatagtgttgatatagaagcaatccggaatgaaaccaaggtcaccaaatgt
ttcaggcctgactttgtgctggttagacagcatgccttcagtatggccaagaatggagac
caccgacacatagtgattgggttgcagtatgctggtctcccaggtgtaaactctctgcac
tctgtctacaacttctgtgacaagccatgggtgtttgctaatatggtgagattgtacaaa
caactgggaccagaggaattcccactgatcgagcaggtttactatcccaaccacagggaa
atgatcaccactcctggtttccctgtggtggtgaaaatgggccacgcccactcagggatg
gggaaggtgaaagtggacaatcaatatgacttccaagatattgccagtgttgttgctctg
accaagacctatgccacatctgaacctttcattgatgcaaagtacgatgtccgcatccag
aagattggagacaattacaaggcctacatgcggacatcgatttcagggaactggaaaacc
aacactggttcagccatgctggagcagatagccatgtcagacaggtatcgaatgtgggtg
gactcctgctctgaggtgtttggtggtttagatatgtgtgctgtggaggctctgcatggg
aaagatggcaaggattacatcatagaggtggtgggctgctccatgcccctgattggagac
cagcaggatgaagaccgtgcacaaattgcagaattggtcgtctccaaaatgaaccagaca
gtcccacacattgcaagtccctcacctgtccgccccacagctgcacagcccgcacagaaa
gctgcatcccctcagcccatctcacaacccaaagtgccacaggctcagcaacgccctcct
ccccaaggtggcccacaacaagcccccaccagcagtaccgcccctcgccaaggctccccc
tcccagcagcgcccctcaccccaaggccagtcccctgcccaaagctccaacacccagaac
ccctctgcccaggcaccacagcaggccagacaggccagcccaggagctggagcccagcag
cgtcccccagggcaagggcagaaaccctcctctggtcagggctccccccagagatccatg
agccagggtggctcccctcagagccagagggcacagcagtcaggaccccagcagcagcag
agacccccccctggaggcccgggccagaagcccacagggggccagccccagcagaggccc
cagcaaaagccaggtcagcccgccaggcaacagtcccagggaggaggtccccaggttcca
cagcagcagagggctccagcccagcaaggtcgccccggggcccctactactcagcagccc
cgccctagtgcccagggccagggaggccccggagggaaaccccctctgcagcagaaaccc
cagcccccactgaagcccagccatgaccaccctgctatgggagccacccctccactgaac
aagtcccagtctcttaccaatgccttcaacattccagaaaccccagccccgcaggccagc
cttagccaggatgaggtgaaggctgagaccatacgcaacctacgcaaatcttttgccagt
ctcttttcagactga
DBGET
integrated database retrieval system
