Oncorhynchus tshawytscha (Chinook salmon): 112262981
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Entry
112262981 CDS
T05605
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112262981 (adamts13)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
112262981 (adamts13)
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
112262981 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Adt-1
Reprolysin_5
Reprolysin_4
TSP1_spondin
TSP1_CCN
Reprolysin_2
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
112262981
NCBI-ProteinID:
XP_024294670
LinkDB
All DBs
Position
LG12:32913995..32928551
Genome browser
AA seq
1555 aa
AA seq
DB search
MAALALLCLLSVLPGSTAILMRSPLEELFLHSLDQKDMVFYFGTDSAISVPEFQLIWTDC
ASTELHTVPWRCSFETEGKRFVLGLGERKQSFSCQSTLETARNTTLNTTRKSHAMCCQQA
RVLHPPSTKGFLTICARKMQGLVVAGKEKERLYIQPVLQKHIHLTEVRNCSSPGTPHLVF
HQPFTARGPPRHSHMKRLRRRRSAIMPEVTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISSSLTSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVTQLGGACSSQWSCVITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNTDLPVCRVLSCHIKLDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPDQLSSSSSVVVHGSWSSWSQFSPCSRICGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCAQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCEPDSPAPLGATTACLGGTCQLFGCD
GVLKSGKVEDVCGVCGGDSSSCSLTSQSYSGGQAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGNQYVVSGSGSIALNITHPSPLEDGRLVYRLYLTPDLLPLMEELLLPGTVTEET
HIQVYRKYGKEYGEQTSPNITYHFYTPMSNNAFVKEIPRGKWTVVTTSCSVTCGSGIQKS
MYVCMDEDTKEHLEEVYCNSAPLLLLQQTTCHLPACPPSWEMGEFGPCSALCGGGEKVRP
VRCVQRQGADVLQVAVSECPQHLATQSVDTCNFQPCPARWNASEAGECSAVCGPGAAKRV
VTCVRSEGGHDVEVDHSLCSGLFKPPVLVSCVIDVCPIGWESKGQDQPILNKSPGLRYRS
RYLTVYVWSPVIGQCSKTCGNGTLQVWFSCLDHQTRLAVPEVYCDASSKPEPDTESCNPS
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSNMTKPIAVVTCNSN
SCPARWRVLRTGACTTSCDLGLARRHVSCVEYIHGEDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLLCMHMPKPITIRGCQMDDC
RVLEKTSALTHTHTTNTPSLETRDQLPSPQGMEVTPMDEEPLLSPTLSLTQTPPTATEPT
TPQTTTAMPTVTPKTSLCGQLLLEESGTVDLRHETGRCILSIGRPLDEVIHMKVESSSLS
CKKREYVAFYDRLVLVRKCDQLEDTELTSRTNVLLVRQHLLSPGNGVLLTYSSQKNNKKS
HHQDCDVQLFAPSGVIENPTMTSELGSHTCRVLINAPPSVKIRIRALSMGPVVNSTAAQS
TFIMIRDVDVLKTNVFKGQRLFDWRSAGNMAEIEFHGEYLHSNGSFRAEYSFVEP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttggcgctgctctgtctgctgtcagtgctgccaggctccacagcaatacta
atgagatctccattggaggagctatttctgcactccctggatcaaaaggacatggtgttt
tattttggtactgactctgctatttcagtgccggagtttcagctcatctggacagactgt
gcctctacggagctgcatactgtcccctggcgatgctccttcgagaccgaagggaagcgc
tttgtgctggggctcggggagaggaagcagtccttctcctgtcagtccacattagagaca
gctcgtaacaccactctcaacaccacaaggaaaagtcatgccatgtgttgtcagcaggcc
agagttctacatcccccttcaacgaaaggatttctcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagccagtgcttcaaaaa
cacattcatctgactgaagtcagaaactgttccagtccaggaacacctcatctggtgttc
caccagccatttactgccagaggcccccccagacactctcacatgaagaggctgcgtcgc
cgaaggtcagccataatgcctgaggtgacccacctcgagctgctagtggtggtggcgcct
gacgtgcagctggtccacaggcaggacacagagagatacatacttaccaacctcaacatt
gcctcagagctgctgagggacatgacactgggagccaacatgagagtgcatctggtccgc
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctcctcgtct
ctgacgagtgtgtgtgagtgggccagaagggtcatcccctctaatgacactgaccccctg
catgctgaccttgtgttatacatcacaagatttgatctggagctgcccaatgggaacaag
caggtgaggggcgtgacccagctaggcggggcatgttctagccaatggagttgtgtaatc
acagaggacacaggctttgatctgggcatcaccatcgctcatgagataggccacagcttt
ggtataaaccatgatgggattggtaacacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacagcagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgtcctggttggctct
ctgcaagactggaagccaggcctttactatggtgtggacgaccagtgccggatagcgttt
ggtagcaccgccagggcctgctccttcaccaacactgacctgcctgtgtgccgtgttctc
tcctgccacatcaaacttgatgacaacagctcatgtaaacgtctgctggtgcctttgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccagac
cagctcagctcctcttcctctgtggtggtgcacgggtcctggtccagctggtcccagttc
tccccatgctcacggatatgtggtgggggcgtcacttcccggaccaggcaatgcaataac
ccacgacctgcatttggtgggaatgattgcaagggcagggatacagaggcggaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgcgcccagaca
gatctacagcccctgtacctgtcccccaacacggcctccctctatacctggatccccgct
gtaggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaagggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcgttgtgaaccagacagtcca
gctccccttggtgccacgacagcttgtctaggagggacgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtatgtggaggggatagctcc
tcttgcagtctcacctctcagtcttacagtggtggtcaggccagagagtacgtcacattc
ctgaccctgccagtaaacgccactcaggttcacattgtcaacagggcacccgtcttcact
cacctggcggtgttgattgggaatcagtatgttgtgtctgggagtggcagcattgcgtta
aacatcactcacccctctcctctggaggacggtcgtctggtttatcgtctgtacctgacc
cctgacctcctgcctctcatggaggagctgctgctgcctggaactgttacagaggagaca
cacatacaggtctatcggaaatatggaaaagaatatggagaacaaaccagtccaaacatc
acctaccacttttatactcccatgagtaataatgcttttgtaaaagagatacccaggggc
aagtggactgttgtcacaacatcctgctctgtcacctgtggatctggcatacagaaatct
atgtatgtctgtatggatgaagacaccaaggagcatctggaggaggtctattgtaattca
gctccccttctcctgcttcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagatgggggagtttgggccctgcagtgccttgtgtggtggtggagagaaagtgcgccct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtggccgtttctgaatgtcca
caacacttagccacacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagccggggagtgttcagcggtgtgtgggcccggagcggccaaacgcgtt
gtgacatgtgtgcggtccgaaggtggtcatgatgttgaggtggaccatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtgatcgatgtctgccctattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggtaccgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccaatgctcaaagacctgcgga
aatggtaccctgcaggtgtggttttcatgtctggaccaccagaccaggctagcggtgcct
gaggtctactgtgatgcctccagcaaaccagagcctgacacagagtcctgcaacccttcc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctatactgctcccaggagaccgagggagatgaggaggtggttgtg
aacaatacagagtgcagtaacatgaccaaacccatagcagtggtcacatgcaactccaac
agctgtccagccaggtggagagtgctgaggacgggggcctgtactacgtcttgtgatctg
gggttagccaggaggcatgtctcctgtgttgagtatatccatggggaggacagtgaggtg
tctgaggagagatgccatgcagccgttaaacctgctaccacggtaccctgtctggtgcag
gtgtgcaccttcagatgggacgtgaaagactggaaccagtgttcagtgccgtgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgctctgcatgcacatgcccaagcccatcaccatccggggctgccagatggacgactgc
agggtcttagagaagactagtgccctcacccacacacacaccaccaacaccccctcacta
gagaccagggaccagttacccagtccccagggcatggaagtcactcccatggatgaggag
ccactcctgtctcctactctcagcctgacccagacacccccgactgcaacagaaccgacc
accccacagaccaccacagccatgcccactgtgacacctaaaaccagtctgtgtgggcag
cttctgctggaggagtcaggcacagtggacttgagacatgagacaggtcgctgcatcctg
tcaataggccggcccctggatgaggtcatccacatgaaagtagagtccagctccctaagc
tgcaagaaaagggagtatgtggcgttctatgacaggctggtactggtcaggaagtgtgac
cagcttgaggacactgaactgacctccaggaccaatgtcctgctggtgcgccagcatctc
ttgtcccccggaaacggagtgctgctgacttacagcagtcagaagaacaacaagaagagt
caccaccaggactgtgatgtccagttgtttgctcccagcggggtcattgagaatccaacg
atgacctcagagttgggcagtcacacctgtcgagtcctcatcaacgcccctccctcagtg
aagattagaatccgggctctgagcatgggccctgtggtcaacagcacagcagcccagtcc
accttcattatgatacgagatgtagacgtcttgaagaccaacgtgttcaagggccaacgg
cttttcgactggcgatcagctggaaacatggcagagatagaatttcatggcgagtacctg
catagcaatgggagcttccgagctgaatactcattcgtggagccttga
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integrated database retrieval system
