Oncorhynchus tshawytscha (Chinook salmon): 112263000
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Entry
112263000 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112263000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112263000
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112263000
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112263000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
WWE_5
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
zf-RING_16
zf-UDP
Motif
Other DBs
NCBI-GeneID:
112263000
NCBI-ProteinID:
XP_024294703
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All DBs
Position
LG12:34245831..34309796
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AA seq
653 aa
AA seq
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MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDAQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFAGTTLWSPTSGAGSNNIQHNNISAGSGQAKVEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNLTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKTPEDVVRRYTEKVKVAPDEDCTICMERLVTSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVVEDNLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agcgcggcaacgtgccaccacatagagaacgtactgaagggggacgtgcgggggactgtg
gtccttggacaggtggatgcccagctggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggcctgtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagtatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcataccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcctccaacgccatcctggcc
tctcagcgtcgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctc
aatgtggtacggcagagtaacactttcgccggaaccacactctggtccccaacctccggt
gccgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagtt
gaacaggtgcagtcgcccctgtctagttccaacttcccttgttccccggcactgccgtcc
cttccgcttgcacatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaacgggcagaacaacctgaaccggccaggaacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttgactggctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgctgctggcctgcct
gtgtgtctgaccagagcccctaaacccatcctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaaccccagaggatgtggtgcggagatacacggagaaagtgaaggttgcccct
gatgaggactgcaccatctgcatggagaggctggtgacatcatcgggctacgagggtgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaacaaggatggcagtctgcag
tgccccacctgtaaggctatctatggggagaagacaggcacacagccccctgggaagatg
gactaccatgtcatcccccattgcctgcctggctacctggaggccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgctagaggcttcccacggcactgctacctcccagacaatgacaagggcaggaaggtc
ctgaagcttctgatcatggcgtgggaccgccgcctgatcttcaccatcgacacgtccagc
accaccggcgagtcagacacggtggtgtggaacgagatccaccacaagacagagtttggc
tccaacctgacagggcacggctacccagacccaaactacctagacaacgtcctgacagag
ctgtcagcccagggggtcgtggaggacaacctgaaggactga
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