Oncorhynchus tshawytscha (Chinook salmon): 112263077
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Entry
112263077 CDS
T05605
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112263077
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112263077
04261 Adrenergic signaling in cardiomyocytes
112263077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112263077
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112263077
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
dCache_2
sCache_2
Motif
Other DBs
NCBI-GeneID:
112263077
NCBI-ProteinID:
XP_042187067
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Position
LG02:complement(16219227..16516013)
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AA seq
1127 aa
AA seq
DB search
MAICAQSYGIFCLFSIQTILIISLSSPATGSLRFPQHYTMMHWAGRIEKELEKTIQLVTG
TQQIRGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTDFPW
LDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTFAIDQNGYLLLHPNLQPKVGS
RLSSMHPILQPKIINFREPVTLDFLDAELEDSKKEEIRREMIDGKSGQKKIKTLIKSVDE
RYIDEAMRTYTWTPVEGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEG
HVFIAPREYCNELELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVE
KVWKTKDLTTYGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFR
APYRTVNDELLNPENGTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQ
TSPTSDNRQVQQTCGPTSGCEMDCEANSEDLLCYLVDDGGFLIMSNQKDHWNKIGMFFSE
VDPYLMHALYNNSFYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWSSAA
AWSLFQQLLYGMAYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNC
SRLIHAKRLNNTNLLFVVAEKMPCNTCEVEKLSQAETEFKEDNPSCEDMSAARYRKGPAV
CYDYNLSENTSDCGRGHSFHPSLQTLLMIQLFLLYPIASPHILPLLL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtatattctgtctgttctcaatccaaactatcctc
atcattagcttatcttcgccggcaacggggagcctccgcttcccccaacactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactatacagttggtcactgga
acccagcagataagagggatttacaatgagaagaagagtcagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacattgccaagctgctcactagcaag
aggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccctgg
ctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggacggagatggggaagagaacctgatggagaacccctactccatgaagctggag
tttgtggacgatcccaactttaaaaacaaggtcaactactcctacagcgccgtccagatc
cccacagacatttataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggttttcattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagcgccacgggggtcacaagatattacccagccactccatggagagcacccaataag
attgacctgtatgacgtccgcaggcggccatggtacatccaaggggcatcatctcccaag
gacatgatcatcatcgtggacgtgagtggcagtgtcagtggactcactctgaaactgatg
aagacgtcggtcatggagatgctagacactctgtcagatgacgactatgtgaatgtagcc
aggtttaacgagaaggcagatgctgtcgtcccctgttttaagaccttggtccaggccaac
atgagaaacaagaagatcttcaaggagtctatcatgcacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgcccca
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcacag
gacatctttgagaagtacaactggcccaacaaaacaattcgagtatttacattttcagtt
ggacagcacaactatgatgtcacccccttgcagtggatagcttgtgccaacaaaggattc
tactatgagattccatccattggagccatcagaattaacacacaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagcaggtccaatggaccaatgtc
taccaggatgctctgggtctgggtctggtcataactgggaccatgccagtcttcaacctc
accgctgatgcaaattctcagacgcagcttgtccttggtgtcatgggggtggatgttgca
atcaacgaaattaagaggaagacaccaacatacaggcttggagccaatggatacaccttt
gcgatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaaggtaggatca
agactgtcctctatgcatcccatcctgcaacctaagatcattaacttcagagaacctgtc
accctggacttcctggatgctgagctagaggacagtaaaaaggaggagatccgtcgagaa
atgattgatggcaaatcagggcaaaagaaaatcaagactctaattaagtcagttgatgag
aggtacattgatgaggccatgcggacatatacctggacaccagtggagggcacagattac
agtctagggctggtactgcccacatacagtgagaaccacatcaaggctaacctgagtgac
cagatcctgcaggtgcagtattttgaatctctgctgccaaacagttttgagtctgaagga
catgtattcatagctcccagggaatactgcaacgagctagagctctccaacaacaacact
gagttcctgctcaacttcatcgctctcatggagaaggtgacacctgactccaaacaatgt
gacaacctgctccttcataacctcatcctcgacactggcatcatcagacagctggtggag
aaggtgtggaagaccaaagacctcaccacctatggctttctggcagtgtttgctgcaaca
gacggagggattacaagagtgtttcccaacaaggctgctgagacctgggaagaggaccct
gagccttttaatgccagctattaccgccgcagtctggacaacaagggctacatcttcaga
gcgccttatcgcaccgtgaatgatgagctgctgaacccagagaacggtaccataggaatc
ctggtcagcactgcagtggagatcacagtgggagggaaaaccatcaaacctgcagtggtt
ggcgtaaagctggaccttgaggcctgggtggacaaattcaagatcctagctagcaaccaa
acaagtccaacaagtgacaaccgccaagtccaacaaacgtgtggaccaaccagtggctgt
gagatggactgtgaagccaacagcgaagaccttctttgttacctggtggatgacggtggt
ttcctgatcatgtccaatcagaaggatcactggaacaagattggcatgttcttcagtgag
gtggacccctacctgatgcatgctctctacaacaactccttttacaaccggaagcagtcc
tttgactaccagtctgtgtgtgaccccgtgccaagcagcaacaccggggctgcaccaaga
ggagtctttgtgcccaccattgcagactttgtgaacctggcctggtggtcatcagcagct
gcctggtccctatttcagcagctgctctatggaatggcctaccacagttggtttgtcaca
gatgaggtggaggcagaggggatggactccagagagaccagctgtgtgacgatacagact
cagttctacttcactaacatcaacagctcctatgacatcctgcaagactgtggcaactgt
tccaggctgatccatgccaagaggttaaacaacaccaacctgctgtttgtggtggcagag
aagatgccctgcaacacctgtgaggtggagaaactgtcccaggcggagacagagttcaag
gaggataacccatcatgtgaggacatgagtgcagcgaggtatcgaaaagggcccgctgtg
tgctacgactacaatctttctgagaacacatcagactgtgggcggggccactccttccac
ccctcactccagaccctgctcatgattcagctcttcctcctctatccaatcgccagccct
catattctgccccttttactttaa
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