Oncorhynchus tshawytscha (Chinook salmon): 112263089
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Entry
112263089 CDS
T05605
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112263089 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112263089 (nelfb)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
112263089 (nelfb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
112263089
NCBI-ProteinID:
XP_024294852
LinkDB
All DBs
Position
LG12:36726022..36739244
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AA seq
583 aa
AA seq
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MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQTENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKDEERYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKLVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAMLSVVVDDYTFTVEQKLPSEEKTSLTYPTALPDAFNKYLQENRVA
CEIGLYYTLHIAKQRNKNALQRLLPALVETHNEMAFGDIFLHLLTGHLTLLSDEFGTEEF
CSAVFDGFLLASFSSKENVHRHTLRLLLHLHHKVLPSCVETLLKTLEPPKQSSDQVKELY
TQLTEKLEAQKKSPAQPDEAPSLDLGLHPVTVPTTASTPTTPL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgggcctacctgaacttgggatatccaatggcgaggatctaaaagaaacactg
actaactgcacagagcctctgaaagccattgaccagtttcagacagaaaatggcattttg
ttgccaactcttcagtcagctcttcccttcctggaccttcacgggactcctcggttggag
tttcaccagtcggtctttgacgagcttcgtgacaagttgatggagcgagtcgccactatc
gcagagggcaaggatgaggaacgttatggtaaacttgaagagcttctagagaagagtttt
ccactggtgaagatgccctccattcagccagtggtcatgcaggttctgaaacatcttcca
aaggttccagagaaaaagctgaagcttgtaatggctgataaggaactgtataaggtctgt
gctgttgaggtgaagaggcagatctggcaggacaaccaggctctcttcggggatgaggtt
tcgcccctgctcaagcagtatattgtggagaaggaggcagcacttttcagcagtgatctc
tctattctgcacaacttcttcagcccctcccccaaagcaagacgccaaggagaggtagtc
ttgaagttgacccagatgattgggaagaatgtgaaactgtatgacatggtacttcagttc
ctgcgaaccctcttcctgcgtacgcgtaacgtccactattgcaccctgcgtgcagagctg
ctcatgtccctccatgacctggacatcagtgagatctgttcagtagacccctgccacaag
ttcacctggtgcttggatgcctgtatccgtgagaagtttgtggatgccaagcgagcccgg
gaattgcaaggttttctggatggagtgaagaaaggacaagagcaagtacttggggacctg
tccatgatcctgtgcgacccatttgcctgtaacaccctggttttgagtacggtccgaaac
ttgcaagaattgctcagccaggacgctctacccagagacagtccagacctgatgctgctg
cttagaatgctgtctcttggacaaggggcttgggatatgattgacagccaagtctttaaa
gagcccagattggaactggaggttgtaacccgttttctaccagccatgttgtcagtagtt
gtggacgactacaccttcaccgtagaacagaagctccccagtgaggagaagacgtccctc
acttatcccacagccctgcctgatgccttcaacaagtacctgcaggagaacagggtggca
tgtgagataggtctgtactacacactccacattgccaagcagaggaacaagaatgcctta
caacggttacttcctgctttggtggagacccacaacgaaatggcctttggggacatcttc
ctgcacctcctgacagggcacctcaccttgctctctgatgagtttgggactgaagagttc
tgctctgccgtgtttgatggctttctgctcgcctctttctctagtaaagagaatgtccac
agacacaccctacgcctgttgcttcaccttcatcacaaagtgttgccatcttgtgtggag
accttactgaaaaccctggaacccccaaaacagagcagtgaccaggtgaaggagttgtac
acccagctgacagagaaactggaggcccaaaagaagagtcctgcccagccagacgaagcc
ccctctcttgacctggggctccatcctgttacagtgcccacgacagcctccactccaacc
acaccactttga
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