Oncorhynchus tshawytscha (Chinook salmon): 112263275
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Entry
112263275 CDS
T05605
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K-like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112263275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112263275
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
hnRNP proteins
112263275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
MOEP19
KH_Vigilin
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
112263275
NCBI-ProteinID:
XP_042186581
LinkDB
All DBs
Position
LG12:40271738..40289062
Genome browser
AA seq
440 aa
AA seq
DB search
METEIEQQEKETSFSNTETNGKRPTEDAEEEQSFKRSRNTDDMVELRILLQSKNAGAVIG
KGGKNIKSLRTDFNASVSVPDSSGPERILSISAEIETVGEILLKIIPTLEEYQQYNGMDF
DCELRLLIHQSLAGSIIGVKGAKIKELRENTQTSIKLFQECCPQSTDRVVLVGGKSERVV
ECIKIMLELIAEAPIKGRAQPYDPNFYDETYDYGGFTLMFEERGGGGSRRPMGGFHMRGG
RGGGGFDRGPSGRGGRGGPVPPARRDYEEMSPRRGPPPPHPVRGGRGESRDRNLAPPHRG
GGDDQYSYDSYRGSADARPNSDRRGRPGDRYGDNMGGGGYDNNSSWDSYQSGGRGSYNDM
GGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQ
IQNAQYLLQNSALHLLGHQD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaattgagcaacaagaaaaagagacctcattcagcaacacagagacaaac
ggtaagcgtcccacagaggacgcggaggaagagcagtcctttaagcgctccaggaacaca
gacgacatggtggagctccgcatactcctgcagagcaaaaatgcaggagcagtgattggg
aagggtggtaaaaacatcaaatccctgcgcacagacttcaatgccagtgtgtcagtccca
gacagcagtgggcctgagcgcattctgagcatcagtgctgaaatcgagaccgtgggagag
atcctgctcaagatcatccctactctggaggagtaccaacagtacaatgggatggacttt
gactgtgagctgaggctactgatccaccagagcctggcaggtagcatcattggtgtgaag
ggagccaagatcaaagagttacgagagaacacccagaccagcatcaagctgttccaggaa
tgctgtccccagtccacggaccgcgtggttctggtcggcggcaagtctgagcgcgtcgtt
gagtgcatcaagatcatgctggagctcatcgctgaggctcccataaaagggcgcgcccag
ccctacgaccccaacttctacgacgagacatacgactacggcggcttcaccctgatgttt
gaggagcgcgggggtggcggcagccggcgccccatggggggcttccacatgcgaggggga
cgaggtggcggaggttttgaccgagggccctctggacgagggggtcgaggggggcccgtg
ccccccgcccgcagggactacgaggagatgagcccccgtcgtggacccccgcctccccac
ccagtgagaggggggaggggtgagagtcgtgaccgcaacctggccccaccacacagagga
ggaggagatgaccagtactcctatgactcctatcggggcagtgcagatgccagacccaac
agtgaccgaagagggagaccaggagatcgctatggtgataacatgggtgggggtggatat
gataacaactcttcctgggactcctatcagtctggtggacgcggttcctacaatgatatg
ggagggccagtcatcaccacacaagtgacgatccctaaagatctggccggctccatcatc
ggtaagggaggtcagaggatcaagcagatccggcatgagtctggcgcctccattaagatc
gacgagccactggagggttctgaggatcgcatcatcaccatcagcggcacccaggaccag
atccaaaacgctcagtacctattgcagaatagcgcactgcacctgctcggacaccaggac
taa
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