Oncorhynchus tshawytscha (Chinook salmon): 112263279
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Entry
112263279 CDS
T05605
Name
(RefSeq) ARF GTPase-activating protein GIT2 isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112263279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112263279
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112263279
Endosome - Golgi transport
Arf GTPase associated proteins
112263279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Shugoshin_N
TTRAP
Motif
Other DBs
NCBI-GeneID:
112263279
NCBI-ProteinID:
XP_024295133
LinkDB
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Position
LG12:40454701..40488008
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AA seq
732 aa
AA seq
DB search
MSKRLRNSEVCADCSVPEPRWASVNRGVLICDECCGVHRSLGRHSSQVRHLTHTPWAPTQ
LQMVQTLYNNGANSIWEHCLLDPMMSGKRKANPQDKVHPNKTEFIKAKYQMLAFVHRMPC
RDDDSFTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFDPEKGNTPLHVAAKAGQVSQ
AELLTVYGADPGAPDSNAKTPINYARQAGYHDLADRLVEIQYELTDRLAFYLCGRKPNHK
NGQHFIVPQMADRNISLDLSELAKAAKKKLQSLSNHLFEELAMDVFDEVDRRETDAVWLA
TQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDSKRRQLGN
SMISPKEKVELILKSRSGGEGLDNDQPDYDSVASDEDTDKEPPSGKDRTKSLDSDLSDGP
VTVQEFLEVKNALSASEAKIQQLMKVNSNLSDELRLMQKKLHSLQSENTSLRRQGPTTHI
YQVPISSGSEYTDPSSSSPSAMKRRQSARASRPMSMSIYETGSGLKPYLPKGDTPYLEEG
APTLQPFFPPHASKLDKQSSMPDSDYDNTTNDYEMKDSGRRGRLRSSGWLGESSSIPELD
DLGAEPDPALPSTEDVIRKTEQITKNIQELLRAAQENKHDSFIPCSERIYVAVTEMAALF
PKRPHSEMVRGPLRLLTSSSFRLQGECRKAAPPEEGPGPDMQLVTQQVIQCAYDIAKAAK
QLVTITTKENSN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaaggaatagtgaggtttgtgcggattgcagtgtcccagagcctcgc
tgggcctctgtgaacaggggcgtgctgatctgcgacgagtgctgtggtgttcatcggagt
ctgggcagacacagctcccaagtccgtcacctgactcacacaccatgggctcctacacag
ctacaaatggttcagactttatacaacaatggtgcaaattcgatatgggagcactgtcta
ctggacccgatgatgagtggtaaacgcaaggccaaccctcaggacaaagtgcacccaaat
aagacagagttcataaaggccaaataccaaatgctggcttttgtccaccggatgccttgt
cgagatgatgacagcttcacagccaaggacttaagcaagcaacttcactccagcgtccgc
actggtaacttggagacgtgtctgaggttactctctcttggagcccaggccaatttcttt
gacccagaaaaagggaatacgccgctgcatgtggctgccaaggcggggcaggtgtctcaa
gcagagctgctgaccgtctacggggctgaccccggcgcccccgactccaacgccaagacc
cccatcaactatgcaaggcaagctggctaccatgacctggctgataggctggtagagatc
cagtatgaacttactgacagactggctttctatctctgtgggagaaagcctaatcataaa
aatggccaacacttcatcgtcccacagatggctgacaggaacatcagtttagatttatca
gaactggcaaaggcggcaaagaagaaactccagtctctcagtaatcatttatttgaggag
ctggcgatggacgtgtttgacgaagtggaccggagggagaccgatgctgtatggctggcg
acacagaaccacagcaccctggtgacagagaccacagtggtgcctttccttcctgtgaac
ccagagtactcatcaacacgaaaccagggacggcaaaagcttgcgagatttaacgcacat
gaatttgcaactcttgtcatcgacatattaagtgactcgaaacgtcgacagctggggaac
tctatgataagtcccaaagaaaaagttgaacttatcctaaaaagccggagtggtggcgag
ggtctggacaacgaccaaccggactacgacagcgtggcctctgacgaggacacggataag
gagccaccctcgggcaaggaccggaccaagagtctggactcagacctgtcagacgggcct
gtcacggtgcaggagttcctggaggtgaagaacgccctgtcggcctcggaggccaagatc
cagcagctgatgaaggtcaacagcaacctgagcgacgagctgcggctgatgcagaaaaag
ctgcattctctgcaaagcgagaacacgtctctcaggcggcagggcccaaccacccatatc
tatcaggtccccatcagcagcgggtcagagtacactgacccttcttcctccagtccctcg
gccatgaagcgccggcagtcggcgcgggccagccggcccatgtccatgtctatttatgag
actggctcaggtctgaagccctacctccctaagggggacaccccctacctagaggagggt
gcccccaccctgcaacccttcttcccacctcatgcctccaagctggacaagcagagcagc
atgccagacagtgactatgacaacacaaccaatgactatgagatgaaggactctggtaga
cgtgggaggctgaggagcagtggctggctgggggagagcagctccatccctgagctggat
gacctgggggcagaaccggacccagcgctccccagcactgaggatgtcatccgtaagacg
gagcagatcaccaagaacatccaggagctgctccgtgccgcgcaggagaataagcacgac
agctttataccctgctccgaaagaatatatgtggccgtaaccgagatggctgctctcttt
cccaagagaccccattcggagatggtgagaggccccctgcgcctattgacgtctagctcc
ttccggctccagggtgagtgtcggaaggcagcaccccccgaggaaggcccagggcctgac
atgcagctggtcacccagcaggttatccagtgtgcctatgacattgccaaagctgccaag
cagcttgtcaccatcaccaccaaggagaacagcaactga
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