Oncorhynchus tshawytscha (Chinook salmon): 112263282
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Entry
112263282 CDS
T05605
Symbol
trpv4
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4 isoform X1
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112263282 (trpv4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112263282 (trpv4)
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112263282 (trpv4)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
112263282
NCBI-ProteinID:
XP_024295139
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Position
LG12:40505237..40531507
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AA seq
891 aa
AA seq
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MNENRSPATLLRRCRIAMTETDTPPSAANKPALSSGSGEGGGSGEGQPDADGTCPDLSAL
ADLFESEEGSQSPQDPAPDVDRPGQLQPGDGRQNLRMKFHGAFKKGISNPMDMLESTIYE
SPVAPGPKKAPMDSLFDYGTYRHTNNKKPRRKKLPRGKTETSCNESLDPPGLDPPKVLKV
FNRVLLFDGVSRADPEALSGLLEYLQGHEKRLTDEEFKEPSTGKTCLPKALLNLYSGQND
TIPMLMDIAEQTVNLHEFINTPFRDVYYRGQTALHIAIERRCKQYVELLVEKGADVHAQA
RGRFFQPRDEGGYFYFGELPLSLAACTNQPNMVHYLTENAHKKADLRRQDSRGNTVLHGL
VHIADNTRDNTRFLTKMYDLLLTKCAKLYPECSLEDILNNDGMSPLMMAAKLGKIGVFQH
IIRREIKDEEARHLSRKFKDWAYGPVYSSLYDLSSLDTCGEEVSVLEILVYNSRIENRHE
MLAVEPINELLRAKWQKFAAVTFYISVVSYLVTMIIFTLVAYYRPSQGTPPYPYTTSTDY
LRLGGEVITLGSGVFFFLTNIKDLFLKKCPGVNSLFVDGSFQLLYFIYSLLVIVTAALYL
SGIEAYVSVMVFALVLGWMNTLYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYVLFMIGY
SSALVSLLAVCPGPDEVCPEEGGCPTYPQCRDTDTFSNFLLDLFKLTIGMGDLDMVSSAQ
YPAVFLILLVTYIILTFVLLLNMLIALMGETVSQVSKESKKIWKLQWATTILDIERSFPV
CLRKSFRSGEMVTVGKNWDGTPDRRWCFRVDEVNWCHWNQNLAIINEDPGKNITETQQCP
GTVHQTVRGLRRDRWSTVVPRVVEQNKGPRPRDLVLEMEPLTPRHRPCAEG
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaccgctcccctgccactctactgagaaggtgccgcatcgccatgacagag
acggacacacctccctcggctgcgaacaagcctgccctgtcctcgggctcaggggaggga
ggaggaagtggcgagggacagcctgatgccgatggtacctgtcctgatctgtcggcactg
gccgacctgtttgagagtgaggagggctcccagtcacctcaggacccggctccggacgtc
gaccggccaggccagctgcagccaggggacggccgacaaaacctccgcatgaagttccac
ggtgcctttaagaaaggcatctccaaccccatggacatgctggagtcgaccatctacgag
tcacccgtggcgcccggccccaagaaagcccccatggactctctctttgactatggtacc
tacaggcacaccaacaacaagaagccacgcaggaagaagctcccgcgaggtaagactgag
acgtcctgcaatgaaagtctggaccctccgggcttggacccacccaaggtgttgaaggtg
tttaaccgcgtgctgctcttcgatggcgtgtcacgggccgacccagaggccctctccggc
ctgctggagtacctacagggtcacgaaaagaggctcaccgacgaggagttcaaagaacca
tctacaggcaagacatgcctgcccaaagcccttctgaacctgtacagtggtcaaaatgac
accattcctatgctgatggacatcgcagagcagacagtcaacctccatgagttcatcaac
acgcccttcagagacgtctactacagaggccagacggcgctccacatcgccattgagagg
cgctgtaagcagtacgtggagctgctggtggagaaaggggcagatgttcacgcccaggcc
cgcggacgcttcttccaacccagggacgaggggggctacttctactttggcgagctgcct
ctgtcgctggcagcgtgcaccaaccagccgaacatggtgcactacttgaccgagaacgcc
cataagaaggctgaccttcgacggcaggactcgcgcggcaacacagtgctacacggcctg
gtgcacatcgccgacaacacccgggacaacacccgtttcctcaccaagatgtacgacctg
ctgctgaccaagtgtgccaaactctacccagaatgcagcctggaggacattctcaacaac
gacggcatgtcgccccttatgatggcagcgaagttggggaaaattggggttttccagcac
atcattcgcagggagatcaaggacgaggaagcgcgtcacctctcacggaagttcaaggac
tgggcgtacggccccgtgtactcctccctgtacgacctctcctcgctggacacctgtgga
gaggaggtgtccgtgctggagatcctggtctacaacagccgcatcgagaatcgccatgag
atgctggctgtggagcccatcaacgagctgttgagggccaagtggcagaagtttgctgcc
gtcaccttttacatcagcgttgtctcctacctggtgaccatgataatcttcaccctggtg
gcctactaccgcccatcccagggaacgcctccgtacccttacaccacctccacagactat
ctgcgtctgggaggggaggttatcaccttgggctccggagtcttcttctttctcaccaac
attaaggacctcttcctgaagaaatgccccggggtgaactccctatttgtcgacggctcc
tttcaactgctctacttcatctactctttgctggtgatagtgactgcggccctctacctg
tcgggtatcgaggcctatgtgtctgtgatggtgtttgcgctggtcctgggctggatgaac
actttatacttcactagaggcctgaagctcaccggcacctacagcatcatgatacagaag
attctcttcaaagacctgttccggtttctgctggtctacgtgctcttcatgattggatac
tcgtcagctctggtgtccctcctggccgtgtgccccgggcctgacgaggtgtgtccggag
gaaggcggctgccccacctacccccagtgccgggacacggacaccttcagcaacttcctg
ctggacctgttcaagctgaccatcggaatgggtgatctggacatggtcagcagcgcccag
tacccagctgtcttcctcatcctgctggtcacctacatcatcctcaccttcgtgctgctg
ctcaacatgttgatcgctctgatgggagagacagtgagccaggtgtccaaggagagcaag
aagatctggaagctgcagtgggctacgacaatcctggacattgagcgctccttccctgtg
tgtctgcggaagtccttccggtccggggagatggtgacagtggggaagaactgggacggt
acccctgaccgccgctggtgcttcagggtggatgaggtcaactggtgccactggaatcag
aacctggccataatcaacgaagacccgggaaagaacataacagagacccagcaatgccct
ggtacagtgcatcaaaccgtccgtggcctgaggagagatcgctggtccacggtggtgcca
cgggttgtggagcagaataaagggccacgaccacgagacctagtactggagatggagcca
ctgacccccagacacagaccctgtgcagagggttag
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