Oncorhynchus tshawytscha (Chinook salmon): 112263305
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Entry
112263305 CDS
T05605
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00514
Other types of O-glycan biosynthesis
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Module
otw_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112263305 (pomt1)
00514 Other types of O-glycan biosynthesis
112263305 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112263305 (pomt1)
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
112263305 (pomt1)
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
O-linked Man type
112263305 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
112263305
NCBI-ProteinID:
XP_024295182
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All DBs
Position
LG12:complement(41180996..41196396)
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AA seq
778 aa
AA seq
DB search
MHATSERGHRLHCSRPSSRLPIYGLTDGKPCWHRNVETFRNSAKLKLMLTTRHTGAMLTS
IKLPIVIRAEINLVLVVVTALGLLSRLYGINFPKAVVFDEVYYGQFVSLYTKQVFFIDES
GPPLGHMILAFGAYLGGFDGNFIWNRIGAEYSSNVPVWSLRLIPALAGSLCVPLCYLLVV
ELGYSHLTALGAALLFLMENSLIVQSRFMLLESVLIFFLLLAVVSYLRFHNAQSGSPVRL
AWLVLTGVTCACAVGVKYMGLFTYFLLLGLAAVHTWQLIGDRALSNGVVLMQVVTRFLAL
VVLPLLLYLGFFYVHLNLLYRSGPHDQMMSSAFQASLEGGLARITQGQPLEVAYGSQVTL
RSVSSKPIPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQDLVVS
SPPRPVRHGDVVQLLHGMTSRLLNTHDVAAPMSPHAQEVSGYIDFNVSMPAQNLWKVDIA
NREAEQDVWKTILSEVRLIHINTSAVLKLSGSSLPEWGYRQLEVVGDKIYKGYQPSGVWN
VEEHRYGRSLEQRERELELHSPTHIDINRNLTFIAKFLELQWKMLTVKHEDSEHKYSSSP
LEWITMNTNIAYWLHPASNAQIHLIGNFVTWTLANLALAVYVLLFLSYLLRRRRKIEDIP
EATWCQLLQAGVVCAGGWAVNYLPFFMMEKTLFLYHYLPALTFQILLIPVVLEHLHTHML
RCASLRRALHGVVLAGLSSVYLSFRTFSPLTYGQPELSAEQLASLRWRDSWDILFRRR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcaacgtctgaacgcggccatcgtctccactgcagcaggccctcaagtcgatta
ccgatttatggtctcactgatggaaagccgtgctggcatcgaaatgttgagacattccga
aacagtgccaaattaaagttaatgctgacaactaggcacacaggagccatgctgacgtct
atcaagttgcctattgtgatcagagccgaaatcaatttggttttggtggtggtgacagcc
cttggacttttgtccagactgtatggaattaacttccccaaagctgtagtgtttgatgag
gtgtactatggacagtttgtatctctctacacaaagcaggtcttctttattgatgagagt
ggtccacctcttggtcacatgattctagcatttggagcttatcttggtggatttgatggt
aactttatctggaacaggattggagcagagtattccagtaatgtgcctgtatggagttta
agactgataccggccctggccgggtcactgtgtgtacccctgtgttaccttctggttgtg
gaactcgggtactcgcacctcacagcactgggggctgcattgctcttcctcatggagaat
tccttgattgttcagtcccgcttcatgctgctggaatctgtgcttatcttcttccttctg
ctcgctgtcgtatcctacctcagatttcacaatgcacaaagcggctcaccagtcagattg
gcgtggctggtgctgactggagtcacatgtgcctgtgctgtgggagtgaagtacatgggt
ctgttcacctactttctgctgctgggcttggcggccgtgcacacgtggcagcttattggg
gacagagcactgagcaatggtgtggtgctgatgcaggtagtgacccgcttcctggccctc
gtggtcctacccctactgctctacctgggcttcttctatgtgcatttgaacctgctctac
cgtagtggcccacacgaccagatgatgagcagtgccttccaggccagcctagagggagga
ttggccaggatcactcaaggtcagcctctagaggtggcttatggctctcaggtgaccctc
cgcagtgtctccagtaaacccataccctgctggctacactcccataaggcaaactatccc
atcaggtatgaaaatgggcgtggtagctctcaccagcagcaagtgacctgttatccgttc
aaagatgtcaacaattggtggataatcaaagatccaggcagacaagaccttgttgtgagc
agcccgccccgccctgttcgccatggtgatgttgtccagcttcttcatggcatgacctcc
cgcctcctcaacacgcacgacgttgcagctcccatgagtcctcacgcacaggaggtgtct
ggctacattgacttcaatgtgtcaatgccagcccagaatctctggaaagtggacattgcg
aacagggaggcggaacaagatgtctggaagactattctctctgaagtacgtttgattcac
atcaacacctcggctgtgctcaagctgagcggttcctcccttccagagtggggctacagg
cagctggaagtggtgggggataagatctacaagggctaccagcccagcggtgtgtggaat
gtagaggagcaccgctacggcaggagtctggagcagagggagagagagctggagctacac
tcccccacacacattgacatcaaccgcaacctcaccttcattgcaaaatttctggagcta
cagtggaagatgctgacggtgaagcatgaggattctgaacacaagtacagctcttcacct
ctagaatggatcacgatgaataccaacattgcgtactggctccaccctgcaagcaatgcc
cagatccacctgattgggaactttgtcacttggaccctggcaaacctcgcccttgcggtg
tacgtccttcttttcctatcgtacctattaaggaggcggcggaaaattgaagacattcca
gaagccacctggtgccagctgcttcaggcaggagtagtgtgtgctggtggctgggccgtc
aactacctgcccttcttcatgatggagaagacactgttcctgtatcactacctgccagct
ctcaccttccagatcctgctgatccctgtggttctggagcacctgcacacacacatgctg
aggtgtgcttctctccggcgtgctcttcatggagtcgtattggcggggttgtcctcagta
tatctgtcctttcggaccttcagtcctctcacctatggtcagccagaactgagcgctgag
cagctggcttcgttgcgctggagggacagttgggacatcttgtttcgcagacgttaa
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