Oncorhynchus tshawytscha (Chinook salmon): 112263306
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Entry
112263306 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112263306
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112263306
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112263306
NCBI-ProteinID:
XP_024295185
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Position
LG12:complement(41200541..41245270)
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AA seq
1188 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLEHSVKTAEKPANKGL
SRLEEHEKDVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAILPLVQVEPRIQHSSA
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPPAALTESAAEPPAKEKESLDKSSATTQSTEVLTEPTEEEAEEVAPPK
PPLPGVKMAEHNPPALPPKKRQSAPSPTRVAVVAPMSHATSGSGLPMGTGLHKQEYEVDA
LQRRFSGGSHSYGGESPRLSPCNSMGKLSKSDEQLSWTVDSGQCSRNTSCETLDTTDHYD
PDYDFLHQDLSSLEQMPPLPVGGCLSPLPESHSESSSPSPCPGPGPPLAQPHFTPAYPSP
QPSLQGSSTSPLYSRMTPALPPPALPEKKRRSGASSGISDGSYSGSSWRVSFERHPSQYD
NLMEEDMPCAPFPLFMPGVSPMTLCHSGDGFVSEFCASETADVPQSPPPLPEKKSRHILK
YMQFVEDYSEPQPSLFYQTPQSESIYEQRNKRFQEVYSFNDSYSSDSVHEPLPPPALPPK
QRQLASHSASPSSSSSSSLSCHLQQSQAAVVEEVGSALSMSVSNSFLSRQSSLTTPMSMD
LAAPGTGGPDPVLVANGSLDSSGGSLAVCLPTDSSFSDTRQTSLSESANEEVGEGEYVNL
YSSSQAKGDGPLSRRDSSAIDDSLEDTASENPLCEDTCNDSRRQKSSEEGPSSEETDELS
LIDHMEIMSRITLKQESDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITP
EDLIKKLHYRYTRFSHSPDTFKKRVSKNTFFVLVRVVDELCLVEMTEDILKQLMDLVFRL
VCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVAARPGTLHDFRSHEIADQLT
LLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIILQEKAQDREKL
LLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKTTSEGLEEYCTLIDSSSSFRA
YRAALADVEPPCIPYLGLILQDLTFVHLGNPDLINGKVNFSKRWQQFNILDSMRRFQQVH
YDLKHNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaagcaagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccattctcccaaaatcaaaaggacaccctcgaagaaagtc
agtaagccacctttagaacatagcgtcaagactgcggagaaacctgctaacaagggtttg
agtcggttagaggagcatgagaaagacgtggtcagtgccttgcgttacttcaagaccatc
attgacaagatggcggtggacaagaaggtgctggagatgttaccaggctctgccagtaag
gtcctggaggccatcctgcctttagtccaagtggaaccaaggatccagcacagttcagcg
gtgtcatcttgtcttaaccgtgtgtaccagagtctgggcaatctcattcgctggtctgac
caagttatgctggagggggtcaacctggaagataaagaaaccattgttaccgtcaccact
gtgatcaaggcagtgctcgacggtgttaaggagctggtgaaactgaccatcgagaaacag
gagcatccctcccctacgtctcctgtcaaaccagtgccaccggccgccctgactgagagc
gctgcagagccacctgccaaagagaaggagagtctggacaagagttcagccacaacccaa
tctacggaagtcttgactgaacccaccgaggaggaagcagaggaggtggcccctccgaaa
ccccctctccctggcgtaaagatggctgaacacaatcctccagctctccctccaaagaag
cgccagtcggcgccctcccccactcgggtggcagtggtggcccccatgagccacgccacc
agtggctccggtcttcccatgggcactggcctccacaagcaggagtacgaggtggacgcg
ttgcagcggcgcttctcagggggcagccattcgtacggaggggagtcgccgcgcctgtcg
ccctgcaacagcatgggcaagctgagcaagtcggacgagcagctatcctggacagtggac
agtggacagtgctcacgcaacaccagctgtgagactctggacaccacagaccactacgac
ccggactacgacttcctgcaccaggacctgtccagcctggaacagatgcctcccctgccg
gtgggggggtgcctcagccccctgcccgaatcccacagcgagtcctcctccccttccccg
tgccctggccccggcccaccactggcccaaccccacttcacccctgcctacccctccccc
cagccgtccctccagggctcctccacgtcccctctctactcccgcatgactccggcattg
ccgccccccgccctgccagaaaagaagcgccgcagcggggccagctcgggcatctctgac
ggctcctactcgggctcctcctggcgtgtctccttcgagcgtcacccgtcccagtatgac
aacctcatggaggaggacatgccgtgtgcccccttccccctgttcatgcctggcgtctcg
cccatgaccctgtgccactccggtgatgggtttgtgtctgagttctgtgccagcgagacg
gcagacgtcccccagagtccacccccactccccgagaagaagagccgccacatactgaag
tacatgcagtttgtggaggactactcggagccccagccctcacttttctaccagacaccg
cagagcgagagcatctacgagcaacgcaacaaacgcttccaggaagtctacagcttcaac
gactcgtatagcagtgactctgttcacgagcctctcccacccccggcactgccacccaaa
cagaggcagctggcctcccactctgcgtctccctcttcctcgtcctcatcctctctctcc
tgccacctccagcagtcgcaggctgcggtggtggaggaggtggggtctgcgctcagcatg
tccgtctctaactccttcctgagccgccagtcctccctgaccacccccatgagcatggac
ctagctgccccgggcactggcggccctgaccctgtgctggtggccaacggctcactggac
agctctggtggctctcttgcagtctgccttcccactgactcttctttctctgacactcgt
caaacctctttgagtgaaagcgctaatgaggaagtcggggagggagagtacgtcaatctg
tactcatccagccaagccaaaggagacgggccgctctcccgccgagactcatccgccata
gatgactcactggaggacactgcctcagagaacccactgtgcgaggacacgtgcaatgac
agccgaaggcaaaagtcctcagaagaagggccgagtagcgaagagacggatgaactttcc
ctcatcgatcacatggagatcatgtcccggataacactaaagcaggagagcgacgacggt
ccagatgtccgagccggatcgggggatattttattagtccacgccacagaaacagaccgc
aaagatcttgtcttgtactgtgaggctttcctgacgacgtacagaacatttataaccccc
gaggacctcatcaaaaagctgcactacagatacaccagatttagtcacagcccagacacc
ttcaagaagagagtcagcaaaaacaccttcttcgttctggtccgtgtggtggacgagctg
tgtttggtggagatgacggaggacatcctgaagcagctgatggacctggtgttcaggctg
gtgtgtaacggtgagctgagcctggcccgcgtgctccgcaagaacatcctggacaaggtg
gagcagaggaagctgctgcgctacaccaactcccttaaaccactggccgcgcgaggtgtc
gctgccagaccggggaccctgcatgatttccgcagtcacgaaattgctgaccagctaact
ctcctggacgcggagctcttctacaaaattgagatccctgaggtgttgctttgggctaag
gagcagaacgaggaaaagagtcctaacctcacacaattcacagagcactttaacaacatg
tcctactgggtacgctccataatcattctgcaggagaaagcccaggaccgagaaaagctc
ctccttaaattcatcaaaataatgaagcacttacggaagctaaataatttcaactcgtat
ttggcaatattatctgccttggattcggctcccatccgaagactggaatggcagaaaaca
acctccgagggcctagaggaatactgcacgttgatagatagctcctcgtcgttccgggcc
taccgagcggcactggctgacgtggagcccccatgtataccatatctgggacttatcctc
caggacttaacctttgtccatctgggcaaccctgacctcatcaacgggaaggtcaacttc
tcaaaacgctggcagcagttcaatatcctggacagcatgaggcgcttccagcaagtgcat
tatgatctgaaacacaacgacgacatcgtctcctttttcaatgacttcagcgaccacctg
gcagaggaggctctgtgggagctgtctctaaagatcaaacctcggaacattacgcggcgc
aaaacagagcgcgaagagaagacatag
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integrated database retrieval system
