Oncorhynchus tshawytscha (Chinook salmon): 112263359
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Entry
112263359 CDS
T05605
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112263359 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112263359 (exosc1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112263359 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
112263359 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
SPK
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
112263359
NCBI-ProteinID:
XP_024295277
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDRLCSTEDCMPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDRVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgataggctatgcagcacagaagactgtatg
cccggtactggggtgtacctacgacacggctacatctactcctcgctagcaggctacgta
ctcaggaagaacgaaggagaggagctaccagtcatctcggtggtgagagaaaccgaggct
cagctactaccagatgtaggagccatagtgacctgtaaggtgaccagtatcaaccccagg
tttgccaaggtccacatcctctacgttggttccacaccactgaaggaccgttttagagga
accatcaggaaagaagatgtacgagcaacagaaaaagacagggtggagacgtataaaagc
ttccgtcctggagacatcgtcctggctaaagtcatctccctgggagacgtccagtccaac
tacctgttgaccacagcagagaacgagctgggggtggtggtagcccacagtgaagcagga
gcccagatggtgcctatcagctggtgtgagatgcagtgcccacggacgcacgccaaagag
tttcgcaaggtggccagggtgcaacctgagtacctgcaggcctga
DBGET
integrated database retrieval system
