Oncorhynchus tshawytscha (Chinook salmon): 112263369
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Entry
112263369 CDS
T05605
Symbol
mef2cb
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112263369 (mef2cb)
04371 Apelin signaling pathway
112263369 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112263369 (mef2cb)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
112263369 (mef2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
112263369
NCBI-ProteinID:
XP_024295290
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Position
LG12:42534678..42631771
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AA seq
516 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCALSKKENKGGESPELESALTLTPRTEEKYKQINEEFDHMIKTHKIP
QGVAPSNYEMPVSIPVSNQNSLIYSHPGGSLGNHNLLPLAHHMQRNSMSPGVTHRPASAG
GLMGADLTTGAVSSAGNGYGNHHRNSPGLLASPGSMNKSMQAKSPPPMNLGMNNRKPDLR
VLIPPGAKNNMPSMNQRINNSQSAQSLATPVVSVATPTLPGQGMGGYPSAISTSYGTEYS
LSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQHSALSQLGNCNSNHLCQSSNLSLPS
AQSLHIKSEPVSPPRDRTSSTPLCYGIHQQHNPSSRQDSGHSPVDSLSSCSSSHEGSDRD
EHRNEFHSPLGLSRPAMDERESPSVKRVRLSEGWAT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgaca
tttacgaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtatgccagcacc
gacatggacaaggtgttgctcaagtacacggagtacaacgagccccacgagagcaggacc
aactctgatatcgtggagacgttgagaaagaagggtctaaacggctgtgacagccccgac
cccgacgcagacgactcggtcggccacagccccgagtctgaggacaagtacaggaaaata
aatgaggacattgatctgatgatcagcagacagagactgtgtgcattaagcaagaaggag
aacaaaggtggcgagagcccggagctcgagtctgctctcaccctcaccccgcgcactgag
gagaaatacaaacagataaacgaggagtttgatcatatgatcaaaactcataagatacct
cagggcgtggccccctccaactacgagatgccggtgtccatccccgttagcaaccagaac
agtctcatctacagccacccaggaggttccctaggcaaccacaacctgttgcccctggca
caccacatgcagaggaacagcatgtcccccggtgtcacacacagacctgccagtgcaggt
ggcctcatgggtgctgacctcaccactggtgcggttagcagtgctggcaacggctacggg
aaccaccaccgtaactcgcccggtctgctggcctctccgggtagcatgaacaagagcatg
caggccaagtctcccccacccatgaacctgggcatgaacaaccgcaagccggacctgcgc
gtgctcatcccccctggagccaagaacaacatgccctccatgaaccagagaataaacaac
tcccagtcagcacagtcattggccacccctgtggtttcagtagcaacgcccaccctacca
ggacaaggcatgggcggttacccatcagccatctccacttcatacggtactgaatactcg
ctgagcagtgcagacctatcctccttgtccggctttaacagtggtagctccctccacctg
ggctccatgagcggttggcaacaacaacacctccagaacatgcagcattcggccctcagt
cagctaggaaattgcaatagcaatcacttatgtcagagttcaaatctctccctgccttct
gctcaaagcctgcacatcaagtccgaacctgtttctcctcctagagatcgcaccagtagc
acaccgttgtgctacggcatccatcagcaacataacccgtcgtcccgccaggactcgggc
cactcccctgtcgacagcctgagcagctgcagcagctcccatgagggcagcgaccgggac
gagcacaggaacgagttccactctccactgggactgtctcggcccgccatggacgagcgc
gagagtccctcggtcaaacgcgtgcgcctgtctgaagggtgggccacatga
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