Oncorhynchus tshawytscha (Chinook salmon): 112263420
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Entry
112263420 CDS
T05605
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
112263420
NCBI-ProteinID:
XP_024295368
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Position
LG12:complement(47240150..47336540)
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AA seq
1012 aa
AA seq
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MRSEALLLYFTLLKIARAGFPEDSEPISISHGNYTKQYPAFFGHKPGRNNTQRHKLDIQL
IIIMNRTLYIAARDHIYTLDTDTVNSEEIFFNKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDTLFVCGTNAFNPSCRTYKMDTMEHLGEEISGMARCPYDAKHSNIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKCLKEPYFVQAVNYGDFIYFFYREIA
MEYNTMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMAEVANAFMGRFKEQKSPDSTWTPVPEDK
VPKPRPGCCAGTPSLEKYKVSNEFPDDTLNFIKQHPLMDEAVPSIANRPWFLKTMVRYRL
TRISVDNAAGPYRNHTVVFLGSEKGIILKFLAKMNSGLLNDSLFLEELNVYNPEKCSIDG
VDDKRIVSMQIDNQGHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGAC
RQVVLDPKSAFEQDVEHGNTDGLGDCQNTFVALNDVQSSPHGHERARHDHPTLPFPTTAH
PPAGGPLGRGGMVEQADTPMPSDNRDPYMAVPSQTQQDANGVIRESYQKGRDQLVPVTLL
AIAVIMAFAMGAIFSGILVYCVCDHRRRDIELSGRKDKDHDRRGSMNSVTKLTGLFETGA
KDSRPEAILTPLMHNGRLTNGKILIKADQHHLDLAGMPTPESTPMQPRRKPSRGSREWER
NQNLINACTKDLQTMGSPVIPTDLPLRASPGHIPSVVVLPLPQHQHQQPYQHEYVEQPHR
SDLSQMSLGDQGATLEYKSLKSPCHSLNLVESDGLPPRVPQREASLTIPPAVPQMGKRLE
VHSSIYGHEYKRSYPMSAQKGSALKKHNTNSSNSSHLSRHQSFNHVESPPPAPQRVDSMH
MNSQGMSHSRQPSMSSYGSLPRTGVKHLKPDVPPKPSLVSLSTKVNSNDSCT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggccttgttgctgtatttcacgctactgaagattgcaagggctggcttc
ccagaagactctgagccaatcagtatttcacatggcaactatacaaagcagtatccggct
ttctttggacacaaaccaggaagaaacaatacacaacggcacaaactggatatccagctc
atcataataatgaaccgaacgttgtatatcgctgccagggatcacatatacacgctggat
acagacaccgtcaactccgaggagatctttttcaacaagaaactgacatggaagtccaga
caggcagatgtggacacctgccgaatgaaggggaagcacaaggatgaatgtcacaatttc
atcaaggtcctcctgcagcaaaacgatgacaccttgtttgtgtgtggaacaaatgctttc
aacccctcctgtcgaacttacaagatggacaccatggaacatctaggggaggagatcagt
gggatggcacggtgcccatacgatgcaaaacactctaacatcgccctgtttgcggatgga
aagctctactccgcaacagtaacagatttcctagcgattgatgctgtcatttatcgtagc
cttggagatagcccaactttgcgcactgtcaaacatgactccaagtgtctcaaagagccg
tattttgtacaggcagttaactatggtgacttcatctacttcttctatcgagaaattgcc
atggagtacaacacaatgggaaaggtggtgttcccccgtgtggccagggtgtgtaagaac
gatcggggcggctcccagagagttctggagaaacagtggacgtccttcctcaagacccgt
ctcaactgctccatcccaggagactcccacttctacttcaacattctgcaggccgtcacc
gacgtcatccacatcaacggacgtgacgttgtcatggcaaccttctccacaccttacaac
agcattcctgggtcggccgtctgcgcctatgacatggctgaggtggccaatgcgttcatg
ggacgtttcaaagagcagaagtcccctgattccacctggacacctgttcctgaggataaa
gttccaaaaccaaggcccgggtgctgtgctggcacgccgtccttagagaagtacaaggtg
tccaacgagttccctgacgacaccctgaacttcatcaagcagcaccctctcatggatgaa
gctgtgccctctatcgctaacaggccctggtttctcaagaccatggtgcgataccggctc
acccggatctccgtggacaacgctgcgggaccctatcggaatcacactgtcgttttcctg
ggctcggagaaggggatcattctgaaattcctggccaagatgaacagcggtttgctgaat
gacagtctctttctggaggagctcaacgtgtataacccggagaagtgcagcatcgatggt
gtggacgacaaacgtatcgtcagcatgcagatcgacaaccagggccactctctgtttgtg
gccttcacctcctgtgtggtcaaggtgccgctctctcgctgtgagaggcatggcaaatgc
aagaaatcatgtattgcctccagggatccctactgcggctgggtgtccgaaggagcatgc
agacaggtggtgctcgacccaaaatcggccttcgagcaggacgtggagcatggcaacaca
gatggactgggagactgccaaaatacgtttgtggccctcaatgatgttcagtccagtcct
catggtcatgaaagggctcgccatgaccatcccaccctcccattccccaccacggcccat
ccccctgcaggaggaccactgggtcggggcggcatggtggagcaggcggacacccccatg
ccctcagataacagggacccctatatggcagtaccctctcagacccagcaggatgccaat
ggagttatccgtgagagttaccagaaggggcgtgaccagctggtccctgtcacactgctg
gccatcgctgtcatcatggccttcgccatgggtgcgatcttctctggtatcctcgtctac
tgtgtgtgtgaccaccggcgacgagacattgagctgtctgggcgtaaggacaaagaccac
gacaggaggggctccatgaacagcgtgaccaagttgacaggcctgtttgagactggggcc
aaggacagtcgccctgaggccatcctcaccccgctcatgcacaacggccgcctcacgaat
ggtaagattctgatcaaagccgaccagcaccacctggacctggctggcatgcccacccca
gagtccacccccatgcagccccgacgcaagcccagccggggaagccgcgagtgggagagg
aaccagaatctgatcaatgcctgcaccaaggacctgcaaaccatgggctccccagtcatc
cccactgacctacccctgagggcctctccaggccacatccccagtgtggtagtgcttccc
ctgccacagcaccagcatcagcagccctaccagcatgagtatgtagagcagccccaccgc
agcgacctcagccagatgagcctgggtgaccagggtgccacactggagtacaagtcccta
aagagcccctgccacagcctcaacctggtggagagcgacggactgccgccccgagtgccc
caaagggaggcctccctcaccatcccccctgccgtgccccagatgggcaagcggctcgag
gtgcactcctccatctatggccatgagtacaagcggagctacccgatgagtgcccagaaa
ggctctgccctcaaaaagcacaacaccaactcgtccaactcctctcacctgtccagacac
caaagttttaaccatgtggagtcgccgccccccgccccacagagggtggactccatgcac
atgaattcccaggggatgtcccactccagacagcccagcatgagctcttatggttcattg
ccccggaccggggtcaaacacctcaagcctgacgtaccgcccaaaccctctttagtgtcc
ctctcaacgaaagtcaattccaatgactcctgcacataa
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