Oncorhynchus tshawytscha (Chinook salmon): 112263501
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Entry
112263501 CDS
T05605
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112263501
04137 Mitophagy - animal
112263501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112263501
03029 Mitochondrial biogenesis [BR:
otw03029
]
112263501
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112263501
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112263501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
WD40
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
7TM_GPCR_Srbc
Na_trans_assoc
eIF2A
Motif
Other DBs
NCBI-GeneID:
112263501
NCBI-ProteinID:
XP_024295630
LinkDB
All DBs
Position
LG12:56348212..56504479
Genome browser
AA seq
1651 aa
AA seq
DB search
MTVYPKNSVRILSARERGARGLGSQRLLQQLVEEKTRRMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYVTVVKTGKCVHSLVGHRRTPWCLTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNEVHFWDWSRREPFALVKTASETE
RVRLVRFDPLGHYLLTAIVNPSNQQQSDDDSEVPMDSMEMPHFRHRSFLQSQPVHRTPIL
HNFLHILSSRNSGSQSEEQHPPEPAVNSAADSPSLPSGRYSALRNRFRPPYQGCVQHLGM
VCFCSRCSPTQAPSPSGEDPSDPESLETQSYASTFSSARTEPRQPSEPRSSHRPSAFSSV
YSGARGHSLRTPSSGHQQPGRECSGRLAGADWMGSMLNMRPERSGGVGVSPPRTSASSVS
LLSVLRQQECSYQSPVYTSATEGGSFPPAVMSPHTSGNSSVDGPSTSSGRHTLGEGGSNS
PTSIRNVLQCNLNRYFMGYDRMQEMEQSGGAGGESSQEQQTWEMLNNNIDSERPVTPHYQ
PPHSGDDGSGPSRGHMNRCRVCHNLFTFNQGTQRWERTGQTPSQEGSTSWQPPRPNLAFH
NMRQTVIQDPQSSDRRQLAQPQPSADEPGGDTAFPHRGTPSPQRERAVGLVYNQETAQWE
RVYRQYASPSPAVNVPQEALNQEMPDESPDDDYLRRRLLESSIMSPSRYDISGSRDHPIY
PDPARLSPAVYYAQRMIQYLSRRDSIRQRSLRYQSRLRPLSSTSDSPGSNPSVENNEVDF
EANGDRARHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHHERGQPGLATHSSVNRV
LAGAVIGDGQSAVASNIANTTYRLQWWDFTKYNLPEISNSSVNVLVQNCKIYNDASCDIS
ADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYSKRFGPNAISVSLSPMGHYVMV
GLASRRILLHHNTDHMVAQVLHLQQPHGGETSMRRMFDVVYPMAADQRRHVSINSARWLP
EPGLGLAYGTNKGDLVICRPVDTQLDGDGPAEHSEPVSAVNNNRGGGTGGRRDGERPGSS
RAPLRSERDMGLMNAIGLQPRHPTPVVTSQGTQTVIPQLQNADTQTDRDPQVPSTFRASE
ATDSSLSNISSDVLSANLSCNDSGTNETCVVGEEEMGSPYKAVEMVFIALVTGSLSFVTV
TGNILVMLSIKVNRHLQTVNNYFLFSLACADLIIGAFSMNLYTVYIIVGYWPLGPVACDL
WLALDYVVSNASVMNLLIISFDRYFCVTKPLSYPARRTTKMAGLMIAGAWILSFILWAPA
ILFWQFIVGERTVPPGECYIQFLSNPAVTFGTAIAAFYLPVVIMMVLYIHISLASRSRVS
KQKPEAEKKKGLKIPNPLKSHILNRQNNNNPSPKPSLESCNTGEAVKNGKIDVSVVSTKA
DASVNPEEKESSNGSSTASIAPKNAKERANSEAISEGCLGIAPAPAPAPEPAPAAATVKL
NPASKWSKIKIVTKQAGDECITAIEIQPPIHGGETRSIPVNRPRKVARKFASIARSQVKR
KRQMAAREKKVTKTIFAILLAFILTWTPYNVMVLISTFCHSCVPDTVWAIGYWLCYVNST
INPACYALCNATFKKTFKNLLMCQYKNIGTR
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctacccaaagaattcagtgcggatcttatctgcccgggagcgtggtgcccgc
ggccttggctcccagcgcctcctgcagcagcttgttgaggagaagacccggaggatgaaa
tggcagagtcagaaagtggagttgccggacagccctcgttctaccttcctgttggctttt
agcccggacaggaccttaatggcctccacacatgtcaaccacaacatttatgtcacagtg
gttaagacagggaagtgtgttcactctctggttggccatcgccgcactccttggtgtctg
acctttcaccctaccatccctggtttggtggcttcgggatgtctggatggagaggttcgc
atctgggacctgcatggtggcagtgagagctggttcactgagagcaatgtggccattgcc
tccctggcctttcaccctaccgcccagctccttctcatagcaacaaacaatgaggttcac
ttctgggactggagtaggagggagccatttgccctggtcaagactgccagcgagacagag
agagtcagactggtgaggtttgacccactgggtcattacctgttgaccgctatagtgaat
ccctctaaccaacagcagagtgatgatgactctgaggtccccatggatagcatggagatg
ccccactttcgccatcgatccttcctacagtcccaaccggtccaccgtacccccattctc
cacaacttcctgcacatcctgtcatcgaggaactcaggctcacagtctgaggagcagcat
cctcctgaacccgctgtcaatagtgctgctgactctcctagtcttccctctggacgttat
tccgccctgcggaatcgcttccgacccccctaccagggttgtgtgcaacaccttggtatg
gtttgcttctgcagtcggtgctctcccacccaagccccttcaccatctggagaggacccc
tctgaccctgagagcctggagacccagtcctatgcctccaccttctcctctgctcgcact
gagccccggcagccctctgagcctcgctcctcacaccgtccctctgccttcagcagtgtg
tacagcggtgctagaggacactctttacgcactccatcttcaggccaccagcagccaggc
cgggagtgttctgggcgactggcgggggcagactggatgggtagcatgctcaacatgcgg
cctgagcgtagtgggggtgttggggtatctccacccaggactagtgcatcatctgtcagc
ctgctgtctgtgctgagacagcaggagtgctcctatcagtcgcctgtctacacctctgcc
acagagggaggaagctttcccccagcagttatgagcccccacaccagtggaaacagctct
gtagatggacccagcactagtagtggacgccacactctaggggagggagggagcaacagc
cccacctctatccgtaacgtgctgcagtgcaacttgaatcgctacttcatgggttatgat
cgcatgcaggaaatggagcagtcaggtggcgctggtggagagagcagccaagagcaacag
acatgggagatgctcaataataacatagactctgagcggcctgtcacccctcattatcag
cccccccacagcggtgatgatggttctggtccctcccgcggccatatgaaccgctgcagg
gtctgccacaacctgttcacgtttaaccaaggtacacagcgctgggagcgcactggccag
accccatcacaagaggggagcacctcatggcagcccccaagacccaaccttgcctttcac
aacatgaggcagactgtgatacaggatccccagtcctctgacaggagacagttagcacag
ccacagcccagtgctgatgaacctggaggggacacagccttccctcaccggggaacccct
agcccgcagagagaacgggcagtggggttggtgtataatcaggagacagcccagtgggag
agggtttacagacagtatgccagtccaagtccagcggtgaatgtaccacaagaggcctta
aaccaagaaatgcctgacgaaagccctgatgacgattacctgagaaggagacttttggag
tcatctattatgtcgccgtctcggtatgacatatctggctcccgggaccatcccatttat
ccagatcctgccaggttgtcacctgctgtgtattacgcccagcggatgattcagtactta
tctcggcgggacagcattcgccaacgatcactgcgctaccagagccgactgcggcctctc
tcgtccacctcggatagcccaggaagcaacccctccgttgagaacaacgaggtggacttt
gaggctaacggtgatcgcgccagacacagggctccgcgcaacgctcgtatgtctgccccc
tcgcttggcagatttgttccccggaggttcctactgcctgagtatctgccatatgctggg
atcttccaccacgagaggggccagcctggcctggccacccattcctctgtcaacagggtc
ctagcaggtgcggttattggtgacggtcagtcagctgtggccagtaacatcgccaacact
acctaccgcctccagtggtgggacttcaccaagtacaacctacctgaaatcagcaactcc
tcggtcaacgtgctggtgcagaactgtaagatctacaatgacgccagctgtgacatctct
gcagacgggcagctcctggccgtgttcatacccagcagccagcggggcttcccagacgag
ggcatcctggctatctactctctggcgcctcacaacctgggagagatgctctactccaag
agattcggtcctaatgctatttctgtcagcctgtccccaatgggccactacgtgatggta
ggcttggcctctcgcaggatcctgctccatcacaacacagaccacatggtagcgcaagtg
ttacacctgcagcagccccatggtggagagacttccatgaggagaatgtttgatgtggtg
taccccatggccgctgatcaacggagacacgtcagcatcaactcggcccgttggctccca
gaacctggcctgggtcttgcctacggtaccaacaagggagacctagtcatctgcagacct
gtagatacccagttagacggagacggccccgctgagcacagtgagcccgtatctgctgtc
aacaacaatcgaggcggtggtactggtgggagacgcgacggagagcgaccagggagcagc
agggcccccttgaggtctgaaagggacatggggcttatgaacgccattggtctccagccc
cgtcaccctacccccgttgtgacatcacaaggcacacagacagtcatcccacagcttcag
aatgccgacacacagaccgaccgagatccacaggttcccagcacattccgggcctccgaa
gcaacagacagctccttgagcaacatttccagtgatgtcttgtcagccaacctcagctgt
aatgattctggcaccaatgagacctgtgtggtgggggaggaggagatgggaagcccctac
aaagccgtggagatggtcttcatcgccctggttacaggctcccttagttttgtcactgtc
acaggcaacatcctggtgatgctctccattaaagtaaatcggcacctccagacggtcaac
aactacttcctgtttagcctggcgtgtgcagaccttatcattggtgcgttctccatgaac
ctctacactgtctacatcattgtgggatattggcccctgggacctgtagcgtgtgacttg
tggctggccctggattacgtggtgagcaatgcttctgttatgaaccttcttattattagc
tttgaccgctacttctgtgtcaccaagcccctgagctatccagccagaaggaccaccaaa
atggctgggctgatgattgcaggtgcctggattctttccttcattctttgggcccctgct
atcctgttttggcagtttattgttggagaacgcacggttccaccaggagagtgctacatc
cagtttctctccaaccctgccgtcactttcggcacagccatcgctgccttctacctgcct
gtggtcatcatgatggtgctctacatccacatctctctggccagccgcagccgggtgtcc
aagcagaagcccgaggctgagaaaaagaagggcctcaagatacctaatccactcaagagc
cacatccttaacagacagaataacaacaacccgtcccccaagcccagtctggagtcctgc
aacaccggtgaagctgtgaagaatggcaagattgatgtgtctgttgtttccaccaaggct
gacgctagtgtcaatccagaagagaaagagagttccaatggctccagcacagccagcatt
gcccccaaaaatgccaaggagagggccaacagtgaagccatttccgaggggtgccttggc
attgctccagcacctgctcctgcacctgaacctgcacctgcagcggcaaccgttaaactc
aaccctgcctctaaatggtccaagatcaagattgtaaccaagcaggctggtgacgagtgc
attactgccatcgagattcagccacccatccatgggggcgagacccgctctatcccagtc
aaccgcccccggaaggtggcgcgcaagtttgccagtattgcccgcagccaggtgaagagg
aagcgccagatggcagccagggagaaaaaggtgaccaaaaccatcttcgccatcctgctt
gccttcatcctcacatggaccccgtacaatgtcatggtgctcatcagcaccttctgccac
tcctgtgtcccggacactgtgtgggccatcggctactggctgtgctacgtcaacagcacc
atcaacccagcctgctacgccctctgcaacgccaccttcaagaagacctttaagaatctc
ctcatgtgccagtataagaatattggaacaagatga
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integrated database retrieval system
