Oncorhynchus tshawytscha (Chinook salmon): 112263576
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Entry
112263576 CDS
T05605
Symbol
cdh31
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371
Apelin signaling pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
otw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112263576 (cdh31)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112263576 (cdh31)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112263576 (cdh31)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112263576 (cdh31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112263576 (cdh31)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112263576 (cdh31)
04090 CD molecules [BR:
otw04090
]
112263576 (cdh31)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112263576 (cdh31)
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Major cadherins
112263576 (cdh31)
CD molecules [BR:
otw04090
]
Proteins
112263576 (cdh31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
RibLong
Cadherin_4
PKD_4
Big_13
DUF1366
Motif
Other DBs
NCBI-GeneID:
112263576
NCBI-ProteinID:
XP_024295759
LinkDB
All DBs
Position
LG12:61473047..61485895
Genome browser
AA seq
881 aa
AA seq
DB search
MGAFWFVELGILTLFLQAFNPGSSEESKCLPGFNSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGVTLHNGHKEFYVSTQSKGKKITVPVRVLHEA
RHGHHHHHEMTTQPQPGSSLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENGRGPFPKHM
VQIRSNNDKEVKILYSITGPGADQPPVGLFTVDKNSGFLYVTQPLDREKKDKYILLAHAV
AVGAGKAEAPMDIIVKVIDMNDNKPVFTQDPFTGTVPEASKPGDEVMQVTATDADEEGSA
NSDVRYTILSQEPQLPSPNMFVINPVTGMIRVNAAGLDRENILKYTLEIQAADLEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDDPHSSAWATTFKIV
DGDPQGLFNVSTGPSKMEGIITTAKPLDFEKNNKYTLLVTVANEVPFAVPLPTSTATVIV
NVEDVNEAPVFSPVEKMIKKPEDLPVDSDLVLYTATDPDTARNQKVTYKIRNDLAGWLSI
NKDTGLIKVKSPMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTID
ERMIKVCNKESSPQLLSITDKDGAGFAAPYTVQLQGSSLSNWTARMNDTKTGIILTLKTM
LDSGDYTVVLRVSDNQGLHQESTIQASVCDCKGADVQCIDKAVAGFGLSSILGILGAILL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttttggttcgtggagttggggatattaacattgtttctccaggctttcaat
ccagggtcgtcggaggagtcaaaatgtctgccgggtttcaattcagaaatgtacattttc
aaagtagaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagaggggggtgactctgcataatggacataaggagttctat
gtctctacccagtccaagggcaagaagatcacggttccagtcagagtgctgcatgaggcc
agacacggccaccaccatcaccatgagatgaccacccagccccagcctggatcaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatggtagaggccccttcccaaaacatatg
gtgcagatcaggtccaacaatgataaagaggtgaagatcctgtacagcatcactggtcct
ggggctgaccaacctcctgtgggactcttcactgtggacaaaaactcggggtttctctat
gtgacccagcctttggacagggagaaaaaagacaaatacattctcctagcccatgctgtt
gcagtgggtgcaggtaaggctgaggcgcccatggatatcattgtgaaagtcatcgacatg
aatgacaacaaacctgtatttacccaagatccatttacgggaacagtccctgaggcatca
aaaccaggtgatgaggtcatgcaggtaacagccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctcaactaccaagccccaacatg
tttgtcatcaaccctgtgactggaatgattcgggttaacgcagctgggttggacagggag
aatattcttaaatatactttggaaatccaagctgccgatttggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaatgcgccacagtttgtg
acgccttcgtacaccgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggggatgatcctcactcctctgcctgggccaccaccttcaagatagtt
gacggggaccctcaaggccttttcaatgtgagcacaggccctagcaagatggaaggcatc
atcacgacagcaaagccgcttgactttgagaagaacaacaagtacactctgctggtcact
gtggcaaatgaagtcccatttgccgtccccctgcccacctccactgctactgttatagtg
aatgtggaggatgtgaatgaagctccagtcttcagtccagtggagaagatgatcaaaaaa
cctgaggacctccctgttgacagtgacctggttctgtacaccgccacagacccagacact
gcaaggaatcagaaagtcacatacaagatacgcaatgatcttgctggatggctcagtatc
aacaaagacactgggctgatcaaagtcaagagccccatggacagagaatccacttttgtc
caagacaacaaatactctgttgttgttctgggcactgacaatgatgaaatcccagcaact
ggcactggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgac
gagaggatgattaaggtctgcaacaaggagtcctccccacagctgctgtcaatcactgat
aaagacggagcgggcttcgctgctccatacacagtacagcttcaggggtcgtccctttcg
aactggactgccagaatgaatgacacaaaaacgggcattatcctgacactgaagactatg
ttggacagtggagattacacggttgtcctgagagtgtctgacaaccagggcctgcaccag
gagagcaccatccaggcctctgtgtgtgactgcaaaggagctgatgtccagtgcatcgat
aaagctgtagcaggcttcggcctctctagcattctgggaattctaggagccattttacta
ctcctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaag
gagcctctgctgcaggaggacgatgtcagggacaacatctactactatgatgaggaggga
ggtggcgaggatgaccaggattttgacttgagtgttctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggctccctcagctccctcaactcctccagctcaggagacgaccaggactatgac
ctccttcaacagtggggcccgcgcttcaaaaagctgtctgacatgtacggaggaggagag
gattga
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